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Mark2 microtubule affinity regulating kinase 2 [ Rattus norvegicus (Norway rat) ]

Gene ID: 60328, updated on 10-Jul-2024

Summary

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Official Symbol
Mark2provided by RGD
Official Full Name
microtubule affinity regulating kinase 2provided by RGD
Primary source
RGD:708483
See related
EnsemblRapid:ENSRNOG00000021184 AllianceGenome:RGD:708483
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Summary
Enables protein N-terminus binding activity; protein kinase activity; and tau protein binding activity. Involved in several processes, including establishment or maintenance of cell polarity regulating cell shape; generation of neurons; and protein phosphorylation. Located in membrane. Orthologous to human MARK2 (microtubule affinity regulating kinase 2). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Biased expression in Thymus (RPKM 73.1), Spleen (RPKM 64.7) and 9 other tissues See more
Orthologs
human mouse all
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Genomic context

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See Mark2 in Genome Data Viewer
Location:
1q43
Exon count:
22
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 1 NC_086019.1 (213890213..213955417, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 1 NC_051336.1 (204461029..204526247, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 1 NC_005100.4 (222525547..222590727, complement)

Chromosome 1 - NC_086019.1Genomic Context describing neighboring genes Neighboring gene heterogeneous nuclear ribonucleoprotein R, pseudogene 2 Neighboring gene N(alpha)-acetyltransferase 40, NatD catalytic subunit Neighboring gene REST corepressor 2 Neighboring gene uncharacterized LOC134483963 Neighboring gene spindlin interactor and repressor of chromatin binding Neighboring gene zinc finger translocation associated Neighboring gene reticulon 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

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Related articles in PubMed

  1. MARK2 Rescues Nogo-66-Induced Inhibition of Neurite Outgrowth via Regulating Microtubule-Associated Proteins in Neurons In Vitro. Zuo YC, et al. Neurochem Res, 2016 Nov. PMID 27465397
  2. MARK2 and MARK4 Regulate Sertoli Cell BTB Dynamics Through Microtubule and Actin Cytoskeletons. Tang EI, et al. Endocrinology, 2022 Oct 11. PMID 35971301, Free PMC Article
  3. Polarity-regulating kinase partitioning-defective 1/microtubule affinity-regulating kinase 2 negatively regulates development of dendrites on hippocampal neurons. Terabayashi T, et al. J Neurosci, 2007 Nov 28. PMID 18045904, Free PMC Article
  4. Missorting of tau in neurons causes degeneration of synapses that can be rescued by the kinase MARK2/Par-1. Thies E, et al. J Neurosci, 2007 Mar 14. PMID 17360912, Free PMC Article
  5. Structure of the catalytic and ubiquitin-associated domains of the protein kinase MARK/Par-1. Panneerselvam S, et al. Structure, 2006 Feb. PMID 16472737

See all (28) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. MARK2 and MARK4 Regulate Sertoli Cell BTB Dynamics Through Microtubule and Actin Cytoskeletons.
    Title: MARK2 and MARK4 Regulate Sertoli Cell BTB Dynamics Through Microtubule and Actin Cytoskeletons.
  2. a critical role for MARK2 in overcoming Nogo-66-induced inhibition of axon outgrowth in neurons
    Title: MARK2 Rescues Nogo-66-Induced Inhibition of Neurite Outgrowth via Regulating Microtubule-Associated Proteins in Neurons In Vitro.
  3. The results identify MARK2 as an upstream regulator of PINK1 and DeltaN-PINK1 and provide insights into the regulation of mitochondrial trafficking in neurons and neurodegeneration in PD.
    Title: Microtubule affinity-regulating kinase 2 (MARK2) turns on phosphatase and tensin homolog (PTEN)-induced kinase 1 (PINK1) at Thr-313, a mutation site in Parkinson disease: effects on mitochondrial transport.
  4. These results reveal that GAKIN/KIF13B is a key intermediate linking Par1b to the regulation of axon formation.
    Title: Par1b/MARK2 phosphorylates kinesin-like motor protein GAKIN/KIF13B to regulate axon formation.
  5. GSK3beta can also phosphorylate Tau at sites outside the repeat domain, the activation of GSK3beta, and concomitant inactivation of MARK2
    Title: Glycogen synthase kinase (GSK) 3beta directly phosphorylates Serine 212 in the regulatory loop and inhibits microtubule affinity-regulating kinase (MARK) 2.
  6. These results indicate that Par1b/MARK2 negatively regulates dendrite development through phosphorylation of MAP2.
    Title: Polarity-regulating kinase partitioning-defective 1/microtubule affinity-regulating kinase 2 negatively regulates development of dendrites on hippocampal neurons.
  7. Tau-induced synaptic decay can be relieved by the activation of MARK2, which can remove tau from the microtubule tracks and reverse the transport block.
    Title: Missorting of tau in neurons causes degeneration of synapses that can be rescued by the kinase MARK2/Par-1.
Submit: New GeneRIF Correction

Pathways from PubChem

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Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by RGD

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
  
enables ATP binding ISO
Inferred from Sequence Orthology
more info
  
enables ATP binding ISS
Inferred from Sequence or Structural Similarity
more info
  
enables lipid binding IEA
Inferred from Electronic Annotation
more info
  
enables magnesium ion binding IEA
Inferred from Electronic Annotation
more info
  
enables magnesium ion binding ISO
Inferred from Sequence Orthology
more info
  
enables magnesium ion binding ISS
Inferred from Sequence or Structural Similarity
more info
  
enables molecular function activator activity EXP
Inferred from Experiment
more info
 PubMed 
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
enables protein kinase activity IEA
Inferred from Electronic Annotation
more info
  
enables protein serine kinase activity IEA
Inferred from Electronic Annotation
more info
  
enables protein serine/threonine kinase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables protein serine/threonine kinase activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables protein serine/threonine kinase activity IEA
Inferred from Electronic Annotation
more info
  
enables protein serine/threonine kinase activity IMP
Inferred from Mutant Phenotype
more info
 PubMed 
enables protein serine/threonine kinase activity ISO
Inferred from Sequence Orthology
more info
  
enables tau protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
enables tau-protein kinase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables tau-protein kinase activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables tau-protein kinase activity IEA
Inferred from Electronic Annotation
more info
  
enables tau-protein kinase activity IMP
Inferred from Mutant Phenotype
more info
 PubMed 
enables tau-protein kinase activity ISO
Inferred from Sequence Orthology
more info
  
Process Evidence Code Pubs
involved_in Wnt signaling pathway IEA
Inferred from Electronic Annotation
more info
  
involved_in axon development IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in establishment of cell polarity IEA
Inferred from Electronic Annotation
more info
  
involved_in establishment of cell polarity ISO
Inferred from Sequence Orthology
more info
  
involved_in establishment of cell polarity ISS
Inferred from Sequence or Structural Similarity
more info
  
involved_in establishment or maintenance of cell polarity regulating cell shape IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in establishment or maintenance of epithelial cell apical/basal polarity IEA
Inferred from Electronic Annotation
more info
  
involved_in establishment or maintenance of epithelial cell apical/basal polarity ISO
Inferred from Sequence Orthology
more info
  
involved_in establishment or maintenance of epithelial cell apical/basal polarity ISS
Inferred from Sequence or Structural Similarity
more info
  
involved_in intracellular signal transduction IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in intracellular signal transduction IEA
Inferred from Electronic Annotation
more info
  
involved_in intracellular signal transduction ISO
Inferred from Sequence Orthology
more info
  
involved_in intracellular signal transduction ISS
Inferred from Sequence or Structural Similarity
more info
  
involved_in microtubule cytoskeleton organization IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in neuron migration IDA
Inferred from Direct Assay
more info
 PubMed 
involved_in positive regulation of neuron projection development IEA
Inferred from Electronic Annotation
more info
  
involved_in positive regulation of neuron projection development ISO
Inferred from Sequence Orthology
more info
  
involved_in positive regulation of neuron projection development ISS
Inferred from Sequence or Structural Similarity
more info
  
involved_in regulation of axonogenesis IEA
Inferred from Electronic Annotation
more info
  
involved_in regulation of axonogenesis ISO
Inferred from Sequence Orthology
more info
  
involved_in regulation of axonogenesis ISS
Inferred from Sequence or Structural Similarity
more info
  
involved_in regulation of cytoskeleton organization IDA
Inferred from Direct Assay
more info
 PubMed 
involved_in regulation of microtubule cytoskeleton organization IDA
Inferred from Direct Assay
more info
 PubMed 
involved_in regulation of microtubule cytoskeleton organization IEA
Inferred from Electronic Annotation
more info
  
involved_in regulation of microtubule cytoskeleton organization ISO
Inferred from Sequence Orthology
more info
  
involved_in regulation of postsynapse organization IDA
Inferred from Direct Assay
more info
 PubMed 
involved_in regulation of postsynapse organization IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
located_in actin filament IEA
Inferred from Electronic Annotation
more info
  
located_in actin filament ISO
Inferred from Sequence Orthology
more info
  
located_in actin filament ISS
Inferred from Sequence or Structural Similarity
more info
  
located_in basal cortex ISO
Inferred from Sequence Orthology
more info
  
located_in cell projection IEA
Inferred from Electronic Annotation
more info
  
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
  
located_in cytoplasm ISO
Inferred from Sequence Orthology
more info
  
located_in cytoplasm ISS
Inferred from Sequence or Structural Similarity
more info
  
located_in dendrite IEA
Inferred from Electronic Annotation
more info
  
located_in dendrite ISO
Inferred from Sequence Orthology
more info
  
located_in dendrite ISS
Inferred from Sequence or Structural Similarity
more info
  
is_active_in glutamatergic synapse IDA
Inferred from Direct Assay
more info
 PubMed 
is_active_in glutamatergic synapse IMP
Inferred from Mutant Phenotype
more info
 PubMed 
is_active_in glutamatergic synapse ISO
Inferred from Sequence Orthology
more info
  
located_in lateral plasma membrane IEA
Inferred from Electronic Annotation
more info
  
located_in lateral plasma membrane ISO
Inferred from Sequence Orthology
more info
  
located_in lateral plasma membrane ISS
Inferred from Sequence or Structural Similarity
more info
  
located_in membrane IDA
Inferred from Direct Assay
more info
 PubMed 
located_in membrane ISO
Inferred from Sequence Orthology
more info
  
located_in microtubule bundle IEA
Inferred from Electronic Annotation
more info
  
located_in microtubule bundle ISO
Inferred from Sequence Orthology
more info
  
located_in microtubule bundle ISS
Inferred from Sequence or Structural Similarity
more info
  
located_in nucleoplasm IEA
Inferred from Electronic Annotation
more info
  
located_in nucleoplasm ISO
Inferred from Sequence Orthology
more info
  
located_in nucleus ISO
Inferred from Sequence Orthology
more info
  
located_in plasma membrane ISO
Inferred from Sequence Orthology
more info
  
located_in plasma membrane ISS
Inferred from Sequence or Structural Similarity
more info
  
is_active_in postsynapse ISO
Inferred from Sequence Orthology
more info
  

General protein information

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Preferred Names
serine/threonine-protein kinase MARK2
Names
ELKL motif kinase 1
EMK-1
EMK1
MAP/microtubule affinity-regulating kinase 2
serine/threonine kinase
NP_001385562.1
NP_067731.1
XP_006230941.1
XP_006230942.1
XP_006230943.1
XP_006230945.1
XP_006230946.1
XP_006230949.1
XP_017445128.1
XP_017445129.1
XP_038944875.1
XP_038944878.1
XP_063128471.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001398633.1 → NP_001385562.1  serine/threonine-protein kinase MARK2 isoform 2

    Status: VALIDATED

    Source sequence(s)
    JAXUCZ010000001
    UniProtKB/TrEMBL
    A0A8I5ZU08
    Related
    ENSRNOP00000081955.2, ENSRNOT00000110931.2
    Conserved Domains (3) summary
    cd12201
    Location:677 → 775
    MARK2_C; C-terminal, kinase associated domain 1 (KA1), a phospholipid binding domain, of microtubule affinity-regulating kinase 2
    cd14406
    Location:322 → 363
    UBA_MARK2; UBA domain found in serine/threonine-protein kinase MARK2 and similar proteins
    cd14072
    Location:52 → 304
    STKc_MARK; Catalytic domain of the Serine/Threonine Kinases, MAP/microtubule affinity-regulating kinases

  2. NM_021699.3 → NP_067731.1  serine/threonine-protein kinase MARK2 isoform 1

    See identical proteins and their annotated locations for NP_067731.1

    Status: VALIDATED

    Source sequence(s)
    JAXUCZ010000001
    UniProtKB/Swiss-Prot
    O08679
    UniProtKB/TrEMBL
    A0A8I5Y5N7
    Related
    ENSRNOP00000073980.3, ENSRNOT00000091990.3
    Conserved Domains (3) summary
    cd12201
    Location:623 → 721
    MARK2_C; C-terminal, kinase associated domain 1 (KA1), a phospholipid binding domain, of microtubule affinity-regulating kinase 2
    cd14406
    Location:322 → 363
    UBA_MARK2; UBA domain found in serine/threonine-protein kinase MARK2 and similar proteins
    cd14072
    Location:52 → 304
    STKc_MARK; Catalytic domain of the Serine/Threonine Kinases, MAP/microtubule affinity-regulating kinases

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086019.1 Reference GRCr8

    Range
    213890213..213955417 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006230881.5 → XP_006230943.1  serine/threonine-protein kinase MARK2 isoform X3

    See identical proteins and their annotated locations for XP_006230943.1

    UniProtKB/TrEMBL
    A0A8I5ZU08
    Conserved Domains (3) summary
    cd12201
    Location:709 → 807
    MARK2_C; C-terminal, kinase associated domain 1 (KA1), a phospholipid binding domain, of microtubule affinity-regulating kinase 2
    cd14406
    Location:289 → 330
    UBA_MARK2; UBA domain found in serine/threonine-protein kinase MARK2 and similar proteins
    cd14072
    Location:19 → 271
    STKc_MARK; Catalytic domain of the Serine/Threonine Kinases, MAP/microtubule affinity-regulating kinases

  2. XM_017589640.3 → XP_017445129.1  serine/threonine-protein kinase MARK2 isoform X9

    UniProtKB/TrEMBL
    A0A8I5Y5N7, A0A8I6GJH6
    Related
    ENSRNOP00000076876.1, ENSRNOT00000100625.2
    Conserved Domains (3) summary
    cd12201
    Location:608 → 706
    MARK2_C; C-terminal, kinase associated domain 1 (KA1), a phospholipid binding domain, of microtubule affinity-regulating kinase 2
    cd14406
    Location:322 → 363
    UBA_MARK2; UBA domain found in serine/threonine-protein kinase MARK2 and similar proteins
    cd14072
    Location:52 → 304
    STKc_MARK; Catalytic domain of the Serine/Threonine Kinases, MAP/microtubule affinity-regulating kinases

  3. XM_063272401.1 → XP_063128471.1  serine/threonine-protein kinase MARK2 isoform X6

    UniProtKB/TrEMBL
    A0A8I5Y5N7

  4. XM_006230887.5 → XP_006230949.1  serine/threonine-protein kinase MARK2 isoform X8

    UniProtKB/TrEMBL
    A0A8I5Y5N7
    Related
    ENSRNOP00000092104.2, ENSRNOT00000094288.2
    Conserved Domains (3) summary
    cd12201
    Location:632 → 730
    MARK2_C; C-terminal, kinase associated domain 1 (KA1), a phospholipid binding domain, of microtubule affinity-regulating kinase 2
    cd14406
    Location:322 → 363
    UBA_MARK2; UBA domain found in serine/threonine-protein kinase MARK2 and similar proteins
    cd14072
    Location:52 → 304
    STKc_MARK; Catalytic domain of the Serine/Threonine Kinases, MAP/microtubule affinity-regulating kinases

  5. XM_006230883.5 → XP_006230945.1  serine/threonine-protein kinase MARK2 isoform X4

    UniProtKB/TrEMBL
    A0A8I5Y5N7
    Conserved Domains (4) summary
    cd12201
    Location:688 → 786
    MARK2_C; C-terminal, kinase associated domain 1 (KA1), a phospholipid binding domain, of microtubule affinity-regulating kinase 2
    smart00220
    Location:53 → 304
    S_TKc; Serine/Threonine protein kinases, catalytic domain
    cd14406
    Location:322 → 363
    UBA_MARK2; UBA domain found in serine/threonine-protein kinase MARK2 and similar proteins
    cd14072
    Location:52 → 304
    STKc_MARK; Catalytic domain of the Serine/Threonine Kinases, MAP/microtubule affinity-regulating kinases

  6. XM_017589639.3 → XP_017445128.1  serine/threonine-protein kinase MARK2 isoform X7

    UniProtKB/TrEMBL
    A0A8I5ZU08
    Related
    ENSRNOP00000028763.7, ENSRNOT00000028763.8
    Conserved Domains (3) summary
    cd12201
    Location:662 → 760
    MARK2_C; C-terminal, kinase associated domain 1 (KA1), a phospholipid binding domain, of microtubule affinity-regulating kinase 2
    cd14406
    Location:322 → 363
    UBA_MARK2; UBA domain found in serine/threonine-protein kinase MARK2 and similar proteins
    cd14072
    Location:52 → 304
    STKc_MARK; Catalytic domain of the Serine/Threonine Kinases, MAP/microtubule affinity-regulating kinases

  7. XM_039088947.2 → XP_038944875.1  serine/threonine-protein kinase MARK2 isoform X2

    UniProtKB/TrEMBL
    A0A8I5ZU08
    Related
    ENSRNOP00000112253.1, ENSRNOT00000161587.1
    Conserved Domains (3) summary
    cd12201
    Location:733 → 831
    MARK2_C; C-terminal, kinase associated domain 1 (KA1), a phospholipid binding domain, of microtubule affinity-regulating kinase 2
    cd14406
    Location:322 → 363
    UBA_MARK2; UBA domain found in serine/threonine-protein kinase MARK2 and similar proteins
    cd14072
    Location:52 → 304
    STKc_MARK; Catalytic domain of the Serine/Threonine Kinases, MAP/microtubule affinity-regulating kinases

  8. XM_006230884.5 → XP_006230946.1  serine/threonine-protein kinase MARK2 isoform X5

    UniProtKB/TrEMBL
    A0A0G2K6X6, A0A8I5ZU08
    Related
    ENSRNOP00000091631.2, ENSRNOT00000111902.2
    Conserved Domains (3) summary
    cd12201
    Location:686 → 784
    MARK2_C; C-terminal, kinase associated domain 1 (KA1), a phospholipid binding domain, of microtubule affinity-regulating kinase 2
    cd14406
    Location:322 → 363
    UBA_MARK2; UBA domain found in serine/threonine-protein kinase MARK2 and similar proteins
    cd14072
    Location:52 → 304
    STKc_MARK; Catalytic domain of the Serine/Threonine Kinases, MAP/microtubule affinity-regulating kinases

  9. XM_006230879.4 → XP_006230941.1  serine/threonine-protein kinase MARK2 isoform X1

    UniProtKB/TrEMBL
    A0A8I5Y7M0, A0A8I5ZU08
    Related
    ENSRNOP00000077495.1, ENSRNOT00000102315.2
    Conserved Domains (4) summary
    cd12201
    Location:742 → 840
    MARK2_C; C-terminal, kinase associated domain 1 (KA1), a phospholipid binding domain, of microtubule affinity-regulating kinase 2
    smart00220
    Location:53 → 304
    S_TKc; Serine/Threonine protein kinases, catalytic domain
    cd14406
    Location:322 → 363
    UBA_MARK2; UBA domain found in serine/threonine-protein kinase MARK2 and similar proteins
    cd14072
    Location:52 → 304
    STKc_MARK; Catalytic domain of the Serine/Threonine Kinases, MAP/microtubule affinity-regulating kinases

  10. XM_039088950.2 → XP_038944878.1  serine/threonine-protein kinase MARK2 isoform X3

    UniProtKB/TrEMBL
    A0A8I5ZU08
    Conserved Domains (3) summary
    cd12201
    Location:709 → 807
    MARK2_C; C-terminal, kinase associated domain 1 (KA1), a phospholipid binding domain, of microtubule affinity-regulating kinase 2
    cd14406
    Location:289 → 330
    UBA_MARK2; UBA domain found in serine/threonine-protein kinase MARK2 and similar proteins
    cd14072
    Location:19 → 271
    STKc_MARK; Catalytic domain of the Serine/Threonine Kinases, MAP/microtubule affinity-regulating kinases

  11. XM_006230880.5 → XP_006230942.1  serine/threonine-protein kinase MARK2 isoform X3

    See identical proteins and their annotated locations for XP_006230942.1

    UniProtKB/TrEMBL
    A0A8I5ZU08
    Conserved Domains (3) summary
    cd12201
    Location:709 → 807
    MARK2_C; C-terminal, kinase associated domain 1 (KA1), a phospholipid binding domain, of microtubule affinity-regulating kinase 2
    cd14406
    Location:289 → 330
    UBA_MARK2; UBA domain found in serine/threonine-protein kinase MARK2 and similar proteins
    cd14072
    Location:19 → 271
    STKc_MARK; Catalytic domain of the Serine/Threonine Kinases, MAP/microtubule affinity-regulating kinases
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
O08679.1 GenPept UniProtKB/Swiss-Prot:O08679

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