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CC1G_09525 hypothetical protein [ Coprinopsis cinerea okayama7#130 ]

Gene ID: 6014539, updated on 10-Oct-2024

Summary

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Gene symbol
CC1G_09525
Gene description
hypothetical protein
Locus tag
CC1G_09525
See related
FungiDB:CC1G_09525; VEuPathDB:CC1G_09525
Gene type
protein coding
RNA name
hypothetical protein
RefSeq status
PROVISIONAL
Organism
Coprinopsis cinerea okayama7#130 (strain: okayama7#130)
Lineage
Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes; Agaricomycetidae; Agaricales; Psathyrellaceae; Coprinopsis
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Genomic context

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See CC1G_09525 in Genome Data Viewer
Location:
chromosome: 6, map: unlocalized
Exon count:
14

NW_003307539.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene endoglucanase-4 Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003307539.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Insights into evolution of multicellular fungi from the assembled chromosomes of the mushroom Coprinopsis cinerea (Coprinus cinereus). Stajich JE, et al. Proc Natl Acad Sci U S A, 2010 Jun 29. PMID 20547848, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cellulose binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
hypothetical protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_003307539.1 Reference assembly

    Range
    1274274..1277156 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001837922.1 → XP_001837974.1  hypothetical protein CC1G_09525 [Coprinopsis cinerea okayama7#130]

    See identical proteins and their annotated locations for XP_001837974.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    A0A0A8IDB7, A8P0V4
    Conserved Domains (3) summary
    smart00236
    Location:691 → 724
    fCBD; Fungal-type cellulose-binding domain
    COG2133
    Location:245 → 585
    YliI; Glucose/arabinose dehydrogenase, beta-propeller fold [Carbohydrate transport and metabolism]
    pfam16010
    Location:25 → 198
    CDH-cyt; Cytochrome domain of cellobiose dehydrogenase
Nucleotide Protein
Heading Accession and Version

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