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CC1G_00173 pre-mRNA branch site protein p14 [ Coprinopsis cinerea okayama7#130 ]

Gene ID: 6013592, updated on 17-May-2024

Summary

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Gene symbol
CC1G_00173
Gene description
pre-mRNA branch site protein p14
Primary source
FungiDB:CC1G_00173
Locus tag
CC1G_00173
See related
VEuPathDB:CC1G_00173
Gene type
protein coding
RNA name
pre-mRNA branch site protein p14
RefSeq status
PROVISIONAL
Organism
Coprinopsis cinerea okayama7#130 (strain: okayama7#130)
Lineage
Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes; Agaricomycetidae; Agaricales; Psathyrellaceae; Coprinopsis
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Genomic context

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See CC1G_00173 in Genome Data Viewer
Location:
chromosome: 5, map: unlocalized
Exon count:
3

NW_003307540.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene ATP-dependent RNA helicase FAL1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003307540.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Insights into evolution of multicellular fungi from the assembled chromosomes of the mushroom Coprinopsis cinerea (Coprinus cinereus). Stajich JE, et al. Proc Natl Acad Sci U S A, 2010 Jun 29. PMID 20547848, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of ribonucleoprotein complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
pre-mRNA branch site protein p14

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_003307540.1 Reference assembly

    Range
    1262053..1262532
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001836985.1 → XP_001837037.1  pre-mRNA branch site protein p14 [Coprinopsis cinerea okayama7#130]

    See identical proteins and their annotated locations for XP_001837037.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A8NX11
    Conserved Domains (1) summary
    cd12241
    Location:15 → 89
    RRM_SF3B14; RNA recognition motif (RRM) found in pre-mRNA branch site protein p14 (SF3B14) and similar proteins
Nucleotide Protein
Heading Accession and Version

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