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AO090120000196 hypothetical protein [ Aspergillus oryzae RIB40 ]

Gene ID: 5996200, updated on 17-May-2024

Summary

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Gene symbol
AO090120000196
Gene description
hypothetical protein
Locus tag
AO090120000196
See related
FungiDB:AO090120000196; VEuPathDB:AO090120000196
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Aspergillus oryzae RIB40 (strain: RIB40)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus subgen. Circumdati
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Genomic context

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Location:
chromosome: 5
Exon count:
9
Sequence:
Chromosome: 5; NC_036439.1 (3178958..3181001)

Chromosome 5 - NC_036439.1Genomic Context describing neighboring genes Neighboring gene tRNA-Ala Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_036439.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequencing and analysis of Aspergillus oryzae. Machida M, et al. Nature, 2005 Dec 22. PMID 16372010

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-amylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hypothetical protein
XP_001823941.1
  • alpha-amylase

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_036439.1 Reference assembly

    Range
    3178958..3181001
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001823889.3 → XP_001823941.1  unnamed protein product [Aspergillus oryzae RIB40]

    See identical proteins and their annotated locations for XP_001823941.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    P0C1B3, P0C1B4, P10529, P11763, Q00250, Q2U6K7, Q96TH4
    UniProtKB/TrEMBL
    A0A1S9DH83, B0FZ76
    Conserved Domains (2) summary
    cd11319
    Location:26 → 395
    AmyAc_euk_AmyA; Alpha amylase catalytic domain found in eukaryotic Alpha-amylases (also called 1,4-alpha-D-glucan-4-glucanohydrolase)
    pfam09260
    Location:407 → 496
    DUF1966; Domain of unknown function (DUF1966)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P0C1B3.1

Gene LinkOut

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Molecular Biology Databases
Research Materials