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AO090102000011 hypothetical protein [ Aspergillus oryzae RIB40 ]

Gene ID: 5994305, updated on 31-Oct-2024

Summary

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Gene symbol
AO090102000011
Gene description
hypothetical protein
Locus tag
AO090102000011
See related
FungiDB:AO090102000011; VEuPathDB:AO090102000011
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Aspergillus oryzae RIB40 (strain: RIB40)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus subgen. Circumdati
Orthologs
Aspergillus fumigatus all
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Genomic context

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See AO090102000011 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
2
Sequence:
Chromosome: 4; NC_036438.1 (4510396..4511670, complement)

Chromosome 4 - NC_036438.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_036438.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequencing and analysis of Aspergillus oryzae. Machida M, et al. Nature, 2005 Dec 22. PMID 16372010
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables polygalacturonase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hypothetical protein
XP_001822260.1
  • predicted protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_036438.1 Reference assembly

    Range
    4510396..4511670 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001822208.1 → XP_001822260.1  unnamed protein product [Aspergillus oryzae RIB40]

    See identical proteins and their annotated locations for XP_001822260.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q2UBD8
    UniProtKB/TrEMBL
    A0A1S9DSV0
    Conserved Domains (2) summary
    pfam00295
    Location:60 → 394
    Glyco_hydro_28; Glycosyl hydrolases family 28
    cl19188
    Location:41 → 391
    PL-6; Polysaccharide Lyase Family 6
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q2UBD8.1

Gene LinkOut

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Molecular Biology Databases
Research Materials