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AO090023000161 hypothetical protein [ Aspergillus oryzae RIB40 ]

Gene ID: 5992741, updated on 17-May-2024

Summary

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Gene symbol
AO090023000161
Gene description
hypothetical protein
Locus tag
AO090023000161
See related
FungiDB:AO090023000161; VEuPathDB:AO090023000161
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Aspergillus oryzae RIB40 (strain: RIB40)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus subgen. Circumdati
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Genomic context

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See AO090023000161 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
3
Sequence:
Chromosome: 3; NC_036437.1 (406605..407835, complement)

Chromosome 3 - NC_036437.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_036437.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequencing and analysis of Aspergillus oryzae. Machida M, et al. Nature, 2005 Dec 22. PMID 16372010

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables polygalacturonase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in pectin catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hypothetical protein
XP_001820739.1
  • predicted protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_036437.1 Reference assembly

    Range
    406605..407835 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001820687.3 → XP_001820739.1  unnamed protein product [Aspergillus oryzae RIB40]

    See identical proteins and their annotated locations for XP_001820739.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    A4L7I0, P35335, Q2UI78
    UniProtKB/TrEMBL
    I7ZT31
    Conserved Domains (2) summary
    pfam00295
    Location:46 → 363
    Glyco_hydro_28; Glycosyl hydrolases family 28
    cl19188
    Location:84 → 362
    PL-6; Polysaccharide Lyase Family 6
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P35335.2

Gene LinkOut

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Molecular Biology Databases
Research Materials