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AO090003001209 hypothetical protein [ Aspergillus oryzae RIB40 ]

Gene ID: 5992274, updated on 31-Oct-2024

Summary

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Gene symbol
AO090003001209
Gene description
hypothetical protein
Locus tag
AO090003001209
See related
FungiDB:AO090003001209; VEuPathDB:AO090003001209
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Aspergillus oryzae RIB40 (strain: RIB40)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus subgen. Circumdati
Orthologs
Aspergillus fumigatus all
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Genomic context

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See AO090003001209 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
4
Sequence:
Chromosome: 2; NC_036436.1 (5380143..5383269)

Chromosome 2 - NC_036436.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_036436.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequencing and analysis of Aspergillus oryzae. Machida M, et al. Nature, 2005 Dec 22. PMID 16372010
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables carbohydrate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables hydrolase activity, hydrolyzing O-glycosyl compounds IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hypothetical protein
XP_001820291.1
  • maltase glucoamylase and related hydrolases, glycosyl hydrolase family 31

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_036436.1 Reference assembly

    Range
    5380143..5383269
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001820239.3 → XP_001820291.1  unnamed protein product [Aspergillus oryzae RIB40]

    See identical proteins and their annotated locations for XP_001820291.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q12558, Q7LWA9
    UniProtKB/TrEMBL
    A0A1S9DLL7, A0AAN5C2A4
    Conserved Domains (2) summary
    COG1501
    Location:35 → 951
    YicI; Alpha-glucosidase, glycosyl hydrolase family GH31 [Carbohydrate transport and metabolism]
    cd06602
    Location:328 → 760
    GH31_MGAM_SI_GAA; maltase-glucoamylase, sucrase-isomaltase, lysosomal acid alpha-glucosidase
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q12558.1

Gene LinkOut

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Molecular Biology Databases
Research Materials