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AO090003000842 hypothetical protein [ Aspergillus oryzae RIB40 ]

Gene ID: 5991956, updated on 17-May-2024

Summary

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Gene symbol
AO090003000842
Gene description
hypothetical protein
Locus tag
AO090003000842
See related
FungiDB:AO090003000842; VEuPathDB:AO090003000842
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Aspergillus oryzae RIB40 (strain: RIB40)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus subgen. Circumdati
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Genomic context

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Location:
chromosome: 2
Exon count:
6
Sequence:
Chromosome: 2; NC_036436.1 (4373607..4374828, complement)

Chromosome 2 - NC_036436.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_036436.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequencing and analysis of Aspergillus oryzae. Machida M, et al. Nature, 2005 Dec 22. PMID 16372010

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in membrane organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of protein exit from endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of COPII vesicle coating IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of COPII vesicle coat IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum exit site IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hypothetical protein
XP_001819973.1
  • vesicle coat complex COPII, GTPase subunit SAR1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_036436.1 Reference assembly

    Range
    4373607..4374828 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001819921.3 → XP_001819973.1  unnamed protein product [Aspergillus oryzae RIB40]

    See identical proteins and their annotated locations for XP_001819973.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q877B9
    UniProtKB/TrEMBL
    A0A1S9DM86
    Conserved Domains (1) summary
    cd00879
    Location:2 → 189
    Sar1; Sar1 is an essential component of COPII vesicle coats
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q877B9.1

Gene LinkOut

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Molecular Biology Databases
Research Materials