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AO090005000986 hypothetical protein [ Aspergillus oryzae RIB40 ]

Gene ID: 5990515, updated on 31-Oct-2024

Summary

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Gene symbol
AO090005000986
Gene description
hypothetical protein
Locus tag
AO090005000986
See related
FungiDB:AO090005000986; VEuPathDB:AO090005000986
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Aspergillus oryzae RIB40 (strain: RIB40)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus subgen. Circumdati
Orthologs
Aspergillus fumigatus all
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Genomic context

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See AO090005000986 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
1
Sequence:
Chromosome: 1; NC_036435.1 (3790944..3793340, complement)

Chromosome 1 - NC_036435.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene tRNA-Trp Neighboring gene tRNA-Trp

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_036435.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequencing and analysis of Aspergillus oryzae. Machida M, et al. Nature, 2005 Dec 22. PMID 16372010
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-L-arabinofuranosidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ferric iron binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables xylan 1,4-beta-xylosidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in arabinan catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular iron ion homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in iron ion transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in xylan catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plant-type cell wall IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hypothetical protein
XP_001817979.1
  • beta-glucosidase-related glycosidases

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_036435.1 Reference assembly

    Range
    3790944..3793340 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001817927.1 → XP_001817979.1  unnamed protein product [Aspergillus oryzae RIB40]

    See identical proteins and their annotated locations for XP_001817979.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O42698, O59862, Q2UR38
    UniProtKB/TrEMBL
    I8IR17
    Conserved Domains (3) summary
    PLN03080
    Location:37 → 774
    PLN03080; Probable beta-xylosidase; Provisional
    pfam14310
    Location:701 → 764
    Fn3-like; Fibronectin type III-like domain
    cl07971
    Location:98 → 372
    Glyco_hydro_3; Glycosyl hydrolase family 3 N terminal domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q2UR38.1

Gene LinkOut

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Molecular Biology Databases
Research Materials