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LOC588940 heparan sulfate glucosamine 3-O-sulfotransferase 3B1-like [ Strongylocentrotus purpuratus (purple sea urchin) ]

Gene ID: 588940, updated on 14-Dec-2023

Summary

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Gene symbol
LOC588940
Gene description
heparan sulfate glucosamine 3-O-sulfotransferase 3B1-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Strongylocentrotus purpuratus
Lineage
Eukaryota; Metazoa; Echinodermata; Eleutherozoa; Echinozoa; Echinoidea; Euechinoidea; Echinacea; Camarodonta; Echinidea; Strongylocentrotidae; Strongylocentrotus
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Genomic context

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See LOC588940 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
1
Annotation release Status Assembly Chr Location
102 current Spur_5.0 (GCF_000002235.5) Unplaced Scaffold NW_022145605.1 (4795730..4796374)
Build 3.1 previous assembly Spur_3.1 (GCF_000002235.3) Unplaced Scaffold NW_003577507.1 (484396..485040)

NW_022145605.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC115918816 Neighboring gene heparan sulfate glucosamine 3-O-sulfotransferase 2-like Neighboring gene uncharacterized LOC115926610 Neighboring gene uncharacterized LOC100893633

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables [heparan sulfate]-glucosamine 3-sulfotransferase 1 activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
heparan sulfate glucosamine 3-O-sulfotransferase 3B1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Strongylocentrotus purpuratus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Spur_5.0 Primary Assembly

Genomic

  1. NW_022145605.1 Reference Spur_5.0 Primary Assembly

    Range
    4795730..4796374
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030992529.1 → XP_030848389.1  heparan sulfate glucosamine 3-O-sulfotransferase 3B1-like

    UniProtKB/TrEMBL
    A0A7M7PAV9
    Conserved Domains (1) summary
    cl21551
    Location:19 → 196
    Sulfotransfer_3; Sulfotransferase family
Nucleotide Protein
Heading Accession and Version

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