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pomgnt2 protein O-linked mannose N-acetylglucosaminyltransferase 2 (beta 1,4-) [ Strongylocentrotus purpuratus (purple sea urchin) ]

Gene ID: 586701, updated on 17-Aug-2024

Summary

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Symbol
pomgnt2
Full Name
protein O-linked mannose N-acetylglucosaminyltransferase 2 (beta 1,4-)
Primary source
EchinoBase:ECB-GENE-23186968
Gene type
protein coding
RefSeq status
MODEL
Organism
Strongylocentrotus purpuratus
Lineage
Eukaryota; Metazoa; Echinodermata; Eleutherozoa; Echinozoa; Echinoidea; Euechinoidea; Echinacea; Camarodonta; Echinidea; Strongylocentrotidae; Strongylocentrotus
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Genomic context

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See pomgnt2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
102 current Spur_5.0 (GCF_000002235.5) Unplaced Scaffold NW_022145614.1 (27101784..27111046)
Build 3.1 previous assembly Spur_3.1 (GCF_000002235.3) Unplaced Scaffold NW_003578434.1 (54947..58365)

NW_022145614.1Genomic Context describing neighboring genes Neighboring gene DNA translocase FtsK-like Neighboring gene zinc-finger transcription factor Snail Neighboring gene retinoblastoma-like protein 1 Neighboring gene chromodomain-helicase-DNA-binding protein 8

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Gene structure in the sea urchin Strongylocentrotus purpuratus based on transcriptome analysis. Tu Q, et al. Genome Res, 2012 Oct. PMID 22709795, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein O-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked mannosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein O-linked-mannose beta-1,4-N-acetylglucosaminyltransferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Strongylocentrotus purpuratus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Spur_5.0 Primary Assembly

Genomic

  1. NW_022145614.1 Reference Spur_5.0 Primary Assembly

    Range
    27101784..27111046
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030975784.1 → XP_030831644.1  protein O-linked-mannose beta-1,4-N-acetylglucosaminyltransferase 2

    UniProtKB/TrEMBL
    A0A7M7N8M6
    Conserved Domains (1) summary
    pfam04577
    Location:161 → 398
    DUF563; Protein of unknown function (DUF563)
Nucleotide Protein
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