U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

pigb phosphatidylinositol glycan anchor biosynthesis class B [ Strongylocentrotus purpuratus (purple sea urchin) ]

Gene ID: 583162, updated on 14-Dec-2023

Summary

Go to the top of the page Help
Symbol
pigb
Full Name
phosphatidylinositol glycan anchor biosynthesis class B
Primary source
EchinoBase:ECB-GENE-23192166
Gene type
protein coding
RefSeq status
MODEL
Organism
Strongylocentrotus purpuratus
Lineage
Eukaryota; Metazoa; Echinodermata; Eleutherozoa; Echinozoa; Echinoidea; Euechinoidea; Echinacea; Camarodonta; Echinidea; Strongylocentrotidae; Strongylocentrotus
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See pigb in Genome Data Viewer
Location:
chromosome: Un
Exon count:
14
Annotation release Status Assembly Chr Location
102 current Spur_5.0 (GCF_000002235.5) Unplaced Scaffold NW_022145615.1 (15922761..15952726)
Build 3.1 previous assembly Spur_3.1 (GCF_000002235.3) Unplaced Scaffold NW_003578576.1 (24467..46729, complement)

NW_022145615.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC115920555 Neighboring gene uncharacterized LOC100890175 Neighboring gene uncharacterized LOC115920515 Neighboring gene uncharacterized LOC115920581 Neighboring gene protein FAM221B Neighboring gene trichohyalin Neighboring gene eukaryotic translation initiation factor 5B-like

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Gene structure in the sea urchin Strongylocentrotus purpuratus based on transcriptome analysis. Tu Q, et al. Genome Res, 2012 Oct. PMID 22709795, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,2-mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in GPI anchor biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
GPI mannosyltransferase 3

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Strongylocentrotus purpuratus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Spur_5.0 Primary Assembly

Genomic

  1. NW_022145615.1 Reference Spur_5.0 Primary Assembly

    Range
    15922761..15952726
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030976599.1 → XP_030832459.1  GPI mannosyltransferase 3

    UniProtKB/TrEMBL
    A0A7M7N9U9
    Conserved Domains (1) summary
    cl21590
    Location:40 → 534
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.