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cas6f type I-F CRISPR-associated endoribonuclease Cas6/Csy4 [ Acinetobacter venetianus RAG-1 = CIP 110063 ]

Gene ID: 58193313, updated on 24-Dec-2023

Summary

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Gene symbol
cas6f
Gene description
type I-F CRISPR-associated endoribonuclease Cas6/Csy4
Locus tag
F959_RS01975
Gene type
protein coding
Organism
Acinetobacter venetianus RAG-1 = CIP 110063 (strain: CIP 110063, type-material: type strain of Acinetobacter venetianus)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Moraxellales; Moraxellaceae; Acinetobacter
Old locus tag
F959_00396
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Genomic context

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NZ_KB849557.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene type I-F CRISPR-associated protein Csy2 Neighboring gene type I-F CRISPR-associated protein Csy3 Neighboring gene type I-F CRISPR-associated endonuclease Cas1f Neighboring gene metal-dependent hydrolase

Genomic regions, transcripts, and products

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Genomic Sequence:
NZ_KB849557.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Csy4 relies on an unusual catalytic dyad to position and cleave CRISPR RNA. Haurwitz RE, et al. EMBO J, 2012 Jun 13. PMID 22522703, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
type I-F CRISPR-associated endoribonuclease Cas6/Csy4

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_KB849557.1 Reference assembly

    Range
    96576..97187
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_004877065.1 type I-F CRISPR-associated endoribonuclease Cas6/Csy4 [Acinetobacter venetianus]

    See identical proteins and their annotated locations for WP_004877065.1

    UniProtKB/TrEMBL
    N9A3T1
    Conserved Domains (1) summary
    cl09835
    Location:6 → 203
    Cas6_I-F; CRISPR/Cas system-associated RAMP superfamily protein Cas6f
Nucleotide Protein
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