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LOC577062 crk-like protein [ Strongylocentrotus purpuratus (purple sea urchin) ]

Gene ID: 577062, updated on 14-Dec-2023

Summary

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Gene symbol
LOC577062
Gene description
crk-like protein
Gene type
protein coding
RefSeq status
MODEL
Organism
Strongylocentrotus purpuratus
Lineage
Eukaryota; Metazoa; Echinodermata; Eleutherozoa; Echinozoa; Echinoidea; Euechinoidea; Echinacea; Camarodonta; Echinidea; Strongylocentrotidae; Strongylocentrotus
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Genomic context

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Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
102 current Spur_5.0 (GCF_000002235.5) Unplaced Scaffold NW_022145606.1 (9809674..9829982, complement)
Build 3.1 previous assembly Spur_3.1 (GCF_000002235.3) Unplaced Scaffold NW_003577617.1 (321093..342926, complement)

NW_022145606.1Genomic Context describing neighboring genes Neighboring gene proton-coupled folate transporter Neighboring gene proton-coupled folate transporter-like Neighboring gene nuclear pore complex protein Nup160 Neighboring gene ephrin-B1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Gene structure in the sea urchin Strongylocentrotus purpuratus based on transcriptome analysis. Tu Q, et al. Genome Res, 2012 Oct. PMID 22709795, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
crk-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Strongylocentrotus purpuratus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Spur_5.0 Primary Assembly

Genomic

  1. NW_022145606.1 Reference Spur_5.0 Primary Assembly

    Range
    9809674..9829982 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011684738.2 → XP_011683040.1  crk-like protein isoform X2

    UniProtKB/TrEMBL
    A0A7M7PC91
    Conserved Domains (2) summary
    cl15255
    Location:11 → 110
    SH2; Src homology 2 (SH2) domain
    cl17036
    Location:222 → 279
    SH3; Src Homology 3 domain superfamily

  2. XM_777316.5 → XP_782409.3  crk-like protein isoform X1

    UniProtKB/TrEMBL
    A0A7M7RA99
    Conserved Domains (2) summary
    cl15255
    Location:11 → 110
    SH2; Src homology 2 (SH2) domain
    cl17036
    Location:223 → 280
    SH3; Src Homology 3 domain superfamily

  3. XM_011684739.2 → XP_011683041.1  crk-like protein isoform X3

    UniProtKB/TrEMBL
    A0A7M7HQG7
    Conserved Domains (2) summary
    cl15255
    Location:11 → 105
    SH2; Src homology 2 (SH2) domain
    cl17036
    Location:204 → 261
    SH3; Src Homology 3 domain superfamily
Nucleotide Protein
Heading Accession and Version

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