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LOC575722 N-acetylgalactosaminyltransferase 7 [ Strongylocentrotus purpuratus (purple sea urchin) ]

Gene ID: 575722, updated on 14-Dec-2023

Summary

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Gene symbol
LOC575722
Gene description
N-acetylgalactosaminyltransferase 7
Gene type
protein coding
RefSeq status
MODEL
Organism
Strongylocentrotus purpuratus
Lineage
Eukaryota; Metazoa; Echinodermata; Eleutherozoa; Echinozoa; Echinoidea; Euechinoidea; Echinacea; Camarodonta; Echinidea; Strongylocentrotidae; Strongylocentrotus
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Genomic context

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See LOC575722 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
102 current Spur_5.0 (GCF_000002235.5) Unplaced Scaffold NW_022145611.1 (17053633..17078863, complement)
Build 3.1 previous assembly Spur_3.1 (GCF_000002235.3) Unplaced Scaffold NW_003576971.1 (939096..963564)

NW_022145611.1Genomic Context describing neighboring genes Neighboring gene ankyrin repeat and SOCS box protein 2 Neighboring gene uncharacterized LOC100888786 Neighboring gene uncharacterized LOC115929716 Neighboring gene son of sevenless homolog 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Gene structure in the sea urchin Strongylocentrotus purpuratus based on transcriptome analysis. Tu Q, et al. Genome Res, 2012 Oct. PMID 22709795, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
N-acetylgalactosaminyltransferase 7
Names
putative polypeptide N-acetylgalactosaminyltransferase 9-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Strongylocentrotus purpuratus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Spur_5.0 Primary Assembly

Genomic

  1. NW_022145611.1 Reference Spur_5.0 Primary Assembly

    Range
    17053633..17078863 complement
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_776106.5 → XP_781199.4  N-acetylgalactosaminyltransferase 7

    UniProtKB/TrEMBL
    A0A7M7R9Y5
    Conserved Domains (2) summary
    cd02510
    Location:162 → 468
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:484 → 596
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain
Nucleotide Protein
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