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CNTN2 contactin 2 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 574333, updated on 17-Aug-2024

Summary

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Official Symbol
CNTN2provided by VGNC
Official Full Name
contactin 2provided by VGNC
Primary source
VGNC:VGNC:71284
Locus tag
EGK_01752
See related
Ensembl:ENSMMUG00000018797
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See CNTN2 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
25
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 1 NC_041754.1 (62564360..62598793)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 1 NC_027893.1 (161503740..161538215, complement)

Chromosome 1 - NC_041754.1Genomic Context describing neighboring genes Neighboring gene neurofascin Neighboring gene 60S ribosomal protein L13a pseudogene Neighboring gene uncharacterized LOC114680182 Neighboring gene transmembrane protein 81 Neighboring gene RB binding protein 5, histone lysine methyltransferase complex subunit

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
contactin-2
Names
contactin 2 (axonal)

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001265772.1 → NP_001252701.1  contactin-2 precursor

    See identical proteins and their annotated locations for NP_001252701.1

    Status: PROVISIONAL

    Source sequence(s)
    JV667217
    UniProtKB/TrEMBL
    F6ZIK5, G7MEU0, I2CY45
    Related
    ENSMMUP00000051164.2, ENSMMUT00000075141.2
    Conserved Domains (7) summary
    cd05728
    Location:328 → 412
    Ig4_Contactin-2-like; Fourth Ig domain of the neural cell adhesion molecule contactin-2, and similar domains
    cd00063
    Location:815 → 907
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    cd04968
    Location:239 → 324
    IgI_3_Contactin; Third immunoglobulin (Ig) domain of contactin; member of the I-set of Ig superfamily (IgSF) domains
    cd04969
    Location:417 → 505
    Ig5_Contactin; Fifth immunoglobulin (Ig) domain of contactin
    cd05727
    Location:139 → 228
    Ig2_Contactin-2-like; Second Ig domain of the neural cell adhesion molecule contactin-2, and similar domains
    cd05850
    Location:35 → 131
    IgI_1_Contactin-2; First immunoglobulin (Ig) domain of contactin-2; member of the I-set of Ig superfamily domains
    cd05854
    Location:507 → 603
    Ig6_Contactin-2; Sixth immunoglobulin (Ig) domain of contactin-2

RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041754.1 Reference Mmul_10 Primary Assembly

    Range
    62564360..62598793
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015118245.2 → XP_014973731.1  contactin-2 isoform X1

    UniProtKB/TrEMBL
    A0A1D5QSY6, A0A5K1UJU3, A0A663DA79, A0A8J8YML4, F6ZIK5, G7MEU0
    Conserved Domains (9) summary
    cd04968
    Location:239 → 324
    Ig3_Contactin_like; Third Ig domain of contactin
    cd04969
    Location:433 → 505
    Ig5_Contactin_like; Fifth Ig domain of contactin
    cd05727
    Location:131 → 228
    Ig2_Contactin-2-like; Second Ig domain of the neural cell adhesion molecule contactin-2 and similar proteins
    cd05728
    Location:328 → 412
    Ig4_Contactin-2-like; Fourth Ig domain of the neural cell adhesion molecule contactin-2 and similar proteins
    cd05850
    Location:36 → 129
    Ig1_Contactin-2; First Ig domain of contactin-2
    cd05854
    Location:524 → 603
    Ig6_Contactin-2; Sixth Ig domain of contactin-2
    smart00410
    Location:246 → 323
    IG_like; Immunoglobulin like
    cd00063
    Location:815 → 907
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam07679
    Location:327 → 412
    I-set; Immunoglobulin I-set domain

  2. XM_015118253.2 → XP_014973739.1  contactin-2 isoform X1

    UniProtKB/TrEMBL
    A0A1D5QSY6, A0A5K1UJU3, A0A663DA79, A0A8J8YML4, F6ZIK5, G7MEU0
    Conserved Domains (9) summary
    cd04968
    Location:239 → 324
    Ig3_Contactin_like; Third Ig domain of contactin
    cd04969
    Location:433 → 505
    Ig5_Contactin_like; Fifth Ig domain of contactin
    cd05727
    Location:131 → 228
    Ig2_Contactin-2-like; Second Ig domain of the neural cell adhesion molecule contactin-2 and similar proteins
    cd05728
    Location:328 → 412
    Ig4_Contactin-2-like; Fourth Ig domain of the neural cell adhesion molecule contactin-2 and similar proteins
    cd05850
    Location:36 → 129
    Ig1_Contactin-2; First Ig domain of contactin-2
    cd05854
    Location:524 → 603
    Ig6_Contactin-2; Sixth Ig domain of contactin-2
    smart00410
    Location:246 → 323
    IG_like; Immunoglobulin like
    cd00063
    Location:815 → 907
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam07679
    Location:327 → 412
    I-set; Immunoglobulin I-set domain
Nucleotide Protein
Heading Accession and Version

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