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CG34452 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

Gene ID: 5740876, updated on 2-Nov-2024

Summary

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Official Symbol
CG34452provided by FlyBase
Official Full Name
uncharacterized proteinprovided by FlyBase
Primary source
FLYBASE:FBgn0085481
Locus tag
Dmel_CG34452
See related
AllianceGenome:FB:FBgn0085481
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
BP1049; CG33999; Dmel\CG34452
Old locus tag
CG33999; Dmel_CG33999
Summary
Predicted to enable glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase activity. Predicted to be involved in protein glycosylation. Predicted to be located in membrane. Is expressed in spermatozoon. [provided by Alliance of Genome Resources, Nov 2024]
Orthologs
all
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Genomic context

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See CG34452 in Genome Data Viewer
Location:
71F1-71F1; 3-43 cM
Exon count:
4
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (15686352..15687902, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (15679452..15681002, complement)

Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene Polypeptide N-Acetylgalactosaminyltransferase 8 Neighboring gene uncharacterized protein Neighboring gene comm2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A computational and experimental approach to validating annotations and gene predictions in the Drosophila melanogaster genome. Yandell M, et al. Proc Natl Acad Sci U S A, 2005 Feb 1. PMID 15668397, Free PMC Article
  2. High-fidelity promoter profiling reveals widespread alternative promoter usage and transposon-driven developmental gene expression. Batut P, et al. Genome Res, 2013 Jan. PMID 22936248, Free PMC Article
  3. Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster. Liu X, et al. RNA, 2017 Dec. PMID 28851752, Free PMC Article
  4. The Release 6 reference sequence of the Drosophila melanogaster genome. Hoskins RA, et al. Genome Res, 2015 Mar. PMID 25589440, Free PMC Article
  5. Sequence finishing and mapping of Drosophila melanogaster heterochromatin. Hoskins RA, et al. Science, 2007 Jun 15. PMID 17569867, Free PMC Article

See all (15) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables galactosyltransferase activity ISS
Inferred from Sequence or Structural Similarity
more info
  
enables glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in protein glycosylation ISS
Inferred from Sequence or Structural Similarity
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
uncharacterized protein
Names
CG34452-PB
CG34452-PC
NP_001097611.2
NP_001287073.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_037436.4 Reference assembly

    Range
    15686352..15687902 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001300144.1 → NP_001287073.1  uncharacterized protein Dmel_CG34452, isoform C [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001287073.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A8JNT2, T2DIW9
    Conserved Domains (1) summary
    cl21608
    Location:72 → 183
    Galactosyl_T; Galactosyltransferase

  2. NM_001104141.2 → NP_001097611.2  uncharacterized protein Dmel_CG34452, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001097611.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    A8JNT2, T2DIW9
    Conserved Domains (1) summary
    cl21608
    Location:72 → 183
    Galactosyl_T; Galactosyltransferase
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
A8JNT2 A8JNT2

Gene LinkOut

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