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pelI pectate lyase PelI [ Pectobacterium brasiliense ]

Gene ID: 57241292, updated on 31-Mar-2024

Summary

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Gene symbol
pelI
Gene description
pectate lyase PelI
Locus tag
GT391_RS02180
Gene type
protein coding
Organism
Pectobacterium brasiliense (strain: 1692, nat-host: potato)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Pectobacteriaceae; Pectobacterium
Old locus tag
GT391_02180
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Genomic context

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NZ_CP047495.1Genomic Context describing neighboring genes Neighboring gene HlyD family type I secretion periplasmic adaptor subunit Neighboring gene glycosyl hydrolase family 28 protein Neighboring gene mannonate dehydratase Neighboring gene FCD domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NZ_CP047495.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The crystal structure of pectate lyase peli from soft rot pathogen Erwinia chrysanthemi in complex with its substrate. Creze C, et al. J Biol Chem, 2008 Jun 27. PMID 18430740
  2. Pectate lyase PelI of Erwinia chrysanthemi 3937 belongs to a new family. Shevchik VE, et al. J Bacteriol, 1997 Dec. PMID 9393696, Free PMC Article
  3. Complete Genome Sequence of the Necrotrophic Plant-Pathogenic Bacterium Pectobacterium brasiliense 1692. Liu Y, et al. Microbiol Resour Announc, 2020 Mar 19. PMID 32193231, Free PMC Article

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
pectate lyase PelI
WP_010281754.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_CP047495.1 Reference assembly

    Range
    482780..483823
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_010281754.1 MULTISPECIES: pectate lyase PelI [Pectobacterium]

    See identical proteins and their annotated locations for WP_010281754.1

    UniProtKB/TrEMBL
    A0A255BPH0
    Conserved Domains (1) summary
    pfam03211
    Location:114 → 322
    Pectate_lyase; Pectate lyase
Nucleotide Protein
Heading Accession and Version