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GZ59_RS05390 glycoside hydrolase family 28 protein [ Pectobacterium atrosepticum ]

Gene ID: 57207910, updated on 30-Mar-2024

Summary

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Gene symbol
GZ59_RS05390
Gene description
glycoside hydrolase family 28 protein
Locus tag
GZ59_RS05390
Gene type
protein coding
Organism
Pectobacterium atrosepticum (strain: 21A, nat-host: Solanum tuberosum)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Pectobacteriaceae; Pectobacterium
Old locus tag
GZ59_11210
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Genomic context

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NZ_CP009125.1Genomic Context describing neighboring genes Neighboring gene mannonate dehydratase Neighboring gene pectate lyase PelI Neighboring gene HlyD family type I secretion periplasmic adaptor subunit Neighboring gene type I secretion system permease/ATPase

Genomic regions, transcripts, and products

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Genomic Sequence:
NZ_CP009125.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. SigmoID: a user-friendly tool for improving bacterial genome annotation through analysis of transcription control signals. Nikolaichik Y, et al. PeerJ, 2016. PMID 27257541, Free PMC Article
  2. Genome Sequence of Pectobacterium atrosepticum Strain 21A. Nikolaichik Y, et al. Genome Announc, 2014 Sep 18. PMID 25237028, Free PMC Article

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
glycoside hydrolase family 28 protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_CP009125.1 Reference assembly

    Range
    1205878..1207086
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_011092692.1 glycoside hydrolase family 28 protein [Pectobacterium atrosepticum]

    See identical proteins and their annotated locations for WP_011092692.1

    UniProtKB/TrEMBL
    Q6D880
    Conserved Domains (1) summary
    pfam00295
    Location:62 → 401
    Glyco_hydro_28; Glycosyl hydrolases family 28
Nucleotide Protein
Heading Accession and Version