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GL50803_0010829 Glucosamine-6-phosphate deaminase [ Giardia intestinalis ]

Gene ID: 5702007, updated on 17-May-2024

Summary

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Gene symbol
GL50803_0010829
Gene description
Glucosamine-6-phosphate deaminase
Locus tag
GL50803_0010829
See related
GiardiaDB:GL50803_0010829; VEuPathDB:GL50803_0010829
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Giardia intestinalis (strain: WB C6, culture-collection: ATCC:50803)
Lineage
Eukaryota; Metamonada; Diplomonadida; Hexamitidae; Giardiinae; Giardia
Old locus tag
GL50803_10829
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Genomic context

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See GL50803_0010829 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
1
Sequence:
Chromosome: 1; NC_051856.1 (1317573..1318364)

Chromosome 1 - NC_051856.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene Ribokinase Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_051856.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Cloning of two putative Giardia lamblia glucosamine 6-phosphate isomerase genes only one of which is transcriptionally activated during encystment. Van Keulen H, et al. J Eukaryot Microbiol, 1998 Nov-Dec. PMID 9864853
  2. Genomic minimalism in the early diverging intestinal parasite Giardia lamblia. Morrison HG, et al. Science, 2007 Sep 28. PMID 17901334
  3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glucosamine-6-phosphate deaminase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables identical protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-acetylglucosamine catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in N-acetylneuraminate catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glucosamine catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Glucosamine-6-phosphate deaminase

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_051856.1 Reference assembly

    Range
    1317573..1318364
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001709037.1 → XP_001709089.1  Glucosamine-6-phosphate deaminase [Giardia intestinalis]

    See identical proteins and their annotated locations for XP_001709089.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O97440
    UniProtKB/TrEMBL
    A8B6Y4, E2RTN3, Q549P6, V6TJX3
    Conserved Domains (1) summary
    PTZ00285
    Location:1 → 263
    PTZ00285; glucosamine-6-phosphate isomerase; Provisional
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
O97440.1

Gene LinkOut

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Molecular Biology Databases
Research Materials