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fastkd5 FAST kinase domains 5 [ Danio rerio (zebrafish) ]

Gene ID: 569940, updated on 12-Sep-2024

Summary

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Gene symbol
fastkd5
Gene description
FAST kinase domains 5
Gene type
protein coding
RefSeq status
MODEL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Orthologs
human mouse all
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Genomic context

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See fastkd5 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 5 NC_007116.7 (2723833..2732892, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 5 NC_007116.6 (2429460..2438535)

Chromosome 5 - NC_007116.7Genomic Context describing neighboring genes Neighboring gene myotubularin related protein 4 Neighboring gene Rab9 effector protein with kelch motifs Neighboring gene leucine zipper putative tumor suppressor 3 Neighboring gene heat shock protein 5 Neighboring gene transmembrane protein 127

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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Related articles in PubMed

  1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
FAST kinase domain-containing protein 5, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007116.7 Reference GRCz11 Primary Assembly

    Range
    2723833..2732892 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_693356.10 → XP_698448.3  FAST kinase domain-containing protein 5, mitochondrial

    UniProtKB/TrEMBL
    A0A8N7UVN1
    Conserved Domains (3) summary
    smart00952
    Location:712 → 771
    RAP; This domain is found in various eukaryotic species, particularly in apicomplexans
    pfam06743
    Location:442 → 512
    FAST_1; FAST kinase-like protein, subdomain 1
    pfam08368
    Location:525 → 612
    FAST_2; FAST kinase-like protein, subdomain 2
Nucleotide Protein
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