U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

zbtb44 zinc finger and BTB domain containing 44 [ Danio rerio (zebrafish) ]

Gene ID: 569656, updated on 2-Nov-2024

Summary

Go to the top of the page Help
Official Symbol
zbtb44provided by ZNC
Official Full Name
zinc finger and BTB domain containing 44provided by ZNC
Primary source
ZFIN:ZDB-GENE-060526-201
See related
Ensembl:ENSDARG00000061110 AllianceGenome:ZFIN:ZDB-GENE-060526-201
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
si:dkey-127j5.1
Summary
Predicted to enable metal ion binding activity. Orthologous to human ZBTB44 (zinc finger and BTB domain containing 44). [provided by Alliance of Genome Resources, Nov 2024]
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See zbtb44 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 5 NC_007116.7 (30126790..30151257, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 5 NC_007116.6 (29530463..29551114, complement)

Chromosome 5 - NC_007116.7Genomic Context describing neighboring genes Neighboring gene succinate dehydrogenase complex, subunit D, integral membrane protein a Neighboring gene translocase of inner mitochondrial membrane 8 homolog B (yeast) Neighboring gene ADAM metallopeptidase with thrombospondin type 1 motif, 8a Neighboring gene ADAM metallopeptidase with thrombospondin type 1 motif, 15a

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Expression

Go to the top of the page Help
  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
  

General protein information

Go to the top of the page Help
Preferred Names
zinc finger and BTB domain-containing protein 44

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001144798.1 → NP_001138270.1  zinc finger and BTB domain-containing protein 44

    See identical proteins and their annotated locations for NP_001138270.1

    Status: PROVISIONAL

    Source sequence(s)
    BX897688, CU467998
    UniProtKB/TrEMBL
    A0A8M1NT28, A2BIA1, X1WD63
    Related
    ENSDARP00000081229.5, ENSDART00000086795.6
    Conserved Domains (6) summary
    smart00225
    Location:32 → 136
    BTB; Broad-Complex, Tramtrack and Bric a brac
    COG5048
    Location:404 → 468
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:420 → 440
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:418 → 440
    zf-C2H2; Zinc finger, C2H2 type
    pfam00651
    Location:21 → 133
    BTB; BTB/POZ domain
    pfam13465
    Location:432 → 457
    zf-H2C2_2; Zinc-finger double domain

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007116.7 Reference GRCz11 Primary Assembly

    Range
    30126790..30151257 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005171910.5 → XP_005171967.1  zinc finger and BTB domain-containing protein 44 isoform X1

    See identical proteins and their annotated locations for XP_005171967.1

    UniProtKB/TrEMBL
    A0A8M2BJS0
    Conserved Domains (8) summary
    smart00225
    Location:32 → 136
    BTB; Broad-Complex, Tramtrack and Bric a brac
    COG5048
    Location:404 → 468
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:420 → 440
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00020
    Location:508 → 530
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:418 → 440
    zf-C2H2; Zinc finger, C2H2 type
    pfam00651
    Location:21 → 133
    BTB; BTB/POZ domain
    pfam13465
    Location:432 → 457
    zf-H2C2_2; Zinc-finger double domain
    cl02475
    Location:448 → 511
    LIM; LIM is a small protein-protein interaction domain, containing two zinc fingers

  2. XM_005171911.5 → XP_005171968.1  zinc finger and BTB domain-containing protein 44 isoform X2

    See identical proteins and their annotated locations for XP_005171968.1

    UniProtKB/TrEMBL
    A0A8M1NT28, A2BIA1, X1WD63
    Related
    ENSDARP00000128160.2, ENSDART00000156048.3
    Conserved Domains (6) summary
    smart00225
    Location:32 → 136
    BTB; Broad-Complex, Tramtrack and Bric a brac
    COG5048
    Location:404 → 468
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:420 → 440
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:418 → 440
    zf-C2H2; Zinc finger, C2H2 type
    pfam00651
    Location:21 → 133
    BTB; BTB/POZ domain
    pfam13465
    Location:432 → 457
    zf-H2C2_2; Zinc-finger double domain

  3. XM_005171909.5 → XP_005171966.1  zinc finger and BTB domain-containing protein 44 isoform X1

    See identical proteins and their annotated locations for XP_005171966.1

    UniProtKB/TrEMBL
    A0A8M2BJS0
    Conserved Domains (8) summary
    smart00225
    Location:32 → 136
    BTB; Broad-Complex, Tramtrack and Bric a brac
    COG5048
    Location:404 → 468
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:420 → 440
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00020
    Location:508 → 530
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:418 → 440
    zf-C2H2; Zinc finger, C2H2 type
    pfam00651
    Location:21 → 133
    BTB; BTB/POZ domain
    pfam13465
    Location:432 → 457
    zf-H2C2_2; Zinc-finger double domain
    cl02475
    Location:448 → 511
    LIM; LIM is a small protein-protein interaction domain, containing two zinc fingers

  4. XM_068221299.1 → XP_068077400.1  zinc finger and BTB domain-containing protein 44 isoform X1

Reference GRCz11 ALT_DRER_TU_1

Genomic

  1. NW_018394582.1 Reference GRCz11 ALT_DRER_TU_1

    Range
    21..5340 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.