U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

kcnj6 potassium inwardly rectifying channel subfamily J member 6 [ Danio rerio (zebrafish) ]

Gene ID: 569498, updated on 12-Sep-2024

Summary

Official Symbol
kcnj6provided by ZNC
Official Full Name
potassium inwardly rectifying channel subfamily J member 6provided by ZNC
Primary source
ZFIN:ZDB-GENE-120327-2
See related
Ensembl:ENSDARG00000058985 AllianceGenome:ZFIN:ZDB-GENE-120327-2
Gene type
protein coding
RefSeq status
MODEL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Summary
Human ortholog(s) of this gene implicated in alcohol use disorder and heroin dependence. Orthologous to human KCNJ6 (potassium inwardly rectifying channel subfamily J member 6). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See kcnj6 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 10 NC_007121.7 (124698..146698, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 10 NC_007121.6 (121938..146738, complement)

Chromosome 10 - NC_007121.7Genomic Context describing neighboring genes Neighboring gene phosphatidylinositol glycan anchor biosynthesis, class P Neighboring gene ripply transcriptional repressor 3 Neighboring gene potassium inwardly rectifying channel subfamily J member 15 Neighboring gene ETS transcription factor ERG

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

General protein information

Preferred Names
G protein-activated inward rectifier potassium channel 2

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007121.7 Reference GRCz11 Primary Assembly

    Range
    124698..146698 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005172575.5XP_005172632.1  G protein-activated inward rectifier potassium channel 2

    UniProtKB/TrEMBL
    A0A8M2BKC6
    Related
    ENSDARP00000076416.5, ENSDART00000081978.5
    Conserved Domains (1) summary
    pfam01007
    Location:42358
    IRK; Inward rectifier potassium channel