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mdga1 MAM domain containing glycosylphosphatidylinositol anchor 1 [ Danio rerio (zebrafish) ]

Gene ID: 569180, updated on 12-Sep-2024

Summary

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Gene symbol
mdga1
Gene description
MAM domain containing glycosylphosphatidylinositol anchor 1
See related
Ensembl:ENSDARG00000074376
Gene type
protein coding
RefSeq status
MODEL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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See mdga1 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
17
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 13 NC_007124.7 (44226451..44629860, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 13 NC_007124.6 (44095012..44492493, complement)

Chromosome 13 - NC_007124.7Genomic Context describing neighboring genes Neighboring gene zinc finger, FYVE domain containing 21 Neighboring gene uncharacterized LOC137487440 Neighboring gene uncharacterized LOC108191946 Neighboring gene transfer RNA valine (anticodon CAC) Neighboring gene transfer RNA valine (anticodon AAC) Neighboring gene zinc finger, AN1-type domain 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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Related articles in PubMed

  1. Proper migration and axon outgrowth of zebrafish cranial motoneuron subpopulations require the cell adhesion molecule MDGA2A. Ingold E, et al. Biol Open, 2015 Jan 8. PMID 25572423, Free PMC Article
  2. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

General protein information

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Preferred Names
MAM domain-containing glycosylphosphatidylinositol anchor protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007124.7 Reference GRCz11 Primary Assembly

    Range
    44226451..44629860 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009307574.4 → XP_009305849.2  MAM domain-containing glycosylphosphatidylinositol anchor protein 1

    UniProtKB/TrEMBL
    A0A8M3AZH0
    Related
    ENSDARP00000097773.4, ENSDART00000110092.4
Nucleotide Protein Strain
Heading Accession and Version

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