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iqch IQ motif containing H [ Danio rerio (zebrafish) ]

Gene ID: 567336, updated on 28-Oct-2024

Summary

Official Symbol
iqchprovided by ZNC
Official Full Name
IQ motif containing Hprovided by ZNC
Primary source
ZFIN:ZDB-GENE-050419-242
See related
Ensembl:ENSDARG00000015476 AllianceGenome:ZFIN:ZDB-GENE-050419-242
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
si:dkey-246a16.2
Summary
Orthologous to human IQCH (IQ motif containing H). [provided by Alliance of Genome Resources, Oct 2024]
Orthologs
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Genomic context

See iqch in Genome Data Viewer
Location:
chromosome: 18
Exon count:
21
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 18 NC_007129.7 (19819981..19880936)
105 previous assembly GRCz10 (GCF_000002035.5) 18 NC_007129.6 (19830873..19892717)

Chromosome 18 - NC_007129.7Genomic Context describing neighboring genes Neighboring gene SMAD family member 3b Neighboring gene alpha and gamma adaptin binding protein Neighboring gene zgc:162898 Neighboring gene SKI family transcriptional corepressor 1b

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

General protein information

Preferred Names
IQ motif-containing protein H

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001045129.1NP_001038594.1  IQ motif-containing protein H

    See identical proteins and their annotated locations for NP_001038594.1

    Status: PROVISIONAL

    Source sequence(s)
    BX247951
    UniProtKB/Swiss-Prot
    Q1LXZ7
    Related
    ENSDARP00000115882.1, ENSDART00000135049.3

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007129.7 Reference GRCz11 Primary Assembly

    Range
    19819981..19880936
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005159133.5XP_005159190.1  IQ motif-containing protein H isoform X1

    UniProtKB/TrEMBL
    A0A8M2B5Q4, G1K2Q3
    Related
    ENSDARP00000074143.5, ENSDART00000079691.5

Reference GRCz11 ALT_DRER_TU_1

Genomic

  1. NW_018395021.1 Reference GRCz11 ALT_DRER_TU_1

    Range
    9996..69540
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)