aga aspartylglucosaminidase [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: agaprovided by ZNC
Official Full Name: aspartylglucosaminidaseprovided by ZNC
Primary source: ZFIN:ZDB-GENE-040426-2311
See related: Ensembl:ENSDARG00000004889 AllianceGenome:ZFIN:ZDB-GENE-040426-2311
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: zgc:77327
Summary: Predicted to enable N4-(beta-N-acetylglucosaminyl)-L-asparaginase activity. Predicted to be involved in protein deglycosylation. Predicted to be active in lysosome. Human ortholog(s) of this gene implicated in aspartylglucosaminuria and lysosomal storage disease. Orthologous to human AGA (aspartylglucosaminidase). [provided by Alliance of Genome Resources, Oct 2024]
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 14

Exon count:: 9

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	14	NC_007125.7 (36428441..36437249, complement)
105	previous assembly	GRCz10 (GCF_000002035.5)	14	NC_007125.6 (36088127..36096935, complement)

Chromosome 14 - NC_007125.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

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General gene information

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Markers

fb02h10.x1 (e-PCR)
- UniSTS:189826

fb02h10.x1 (e-PCR)
- UniSTS:189827

Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables N4-(beta-N-acetylglucosaminyl)-L-asparaginase activity	IBA Inferred from Biological aspect of Ancestor more info
enables N4-(beta-N-acetylglucosaminyl)-L-asparaginase activity	IEA Inferred from Electronic Annotation more info
enables hydrolase activity	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
involved_in protein deglycosylation	IBA Inferred from Biological aspect of Ancestor more info

Component	Evidence Code	Pubs
is_active_in cytoplasm	IBA Inferred from Biological aspect of Ancestor more info
is_active_in lysosome	IBA Inferred from Biological aspect of Ancestor more info

General protein information

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Preferred Names: N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase

NP_001103751.1

EC 3.5.1.26

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.