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SCAL phosphoglycan beta 1,2 arabinosyltransferase,(SCA like) [ Leishmania major strain Friedlin ]

Gene ID: 5654806, updated on 30-Oct-2024

Summary

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Gene symbol
SCAL
Gene description
phosphoglycan beta 1,2 arabinosyltransferase,(SCA like)
Locus tag
LMJF_34_0510
Gene type
protein coding
RNA name
phosphoglycan beta 1,2 arabinosyltransferase,(SCA like)
RefSeq status
PROVISIONAL
Organism
Leishmania major strain Friedlin (strain: Friedlin)
Lineage
Eukaryota; Euglenozoa; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania
Orthologs
all
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Genomic context

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See SCAL in Genome Data Viewer
Location:
chromosome: 34
Exon count:
1
Sequence:
Chromosome: 34; NC_007286.2 (206890..209595)

Chromosome 34 - NC_007286.2Genomic Context describing neighboring genes Neighboring gene putative splicing factor ptsr1 interacting protein Neighboring gene amastin-like protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_007286.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome of the kinetoplastid parasite, Leishmania major. Ivens AC, et al. Science, 2005 Jul 15. PMID 16020728, Free PMC Article
  2. Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania. Rogers MB, et al. Genome Res, 2011 Dec. PMID 22038252, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Names
phosphoglycan beta 1,2 arabinosyltransferase,(SCA like)

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_007286.2 Reference assembly

    Range
    206890..209595
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001686090.1 → XP_001686142.1  phosphoglycan beta 1,2 arabinosyltransferase,(SCA like) [Leishmania major strain Friedlin]

    See identical proteins and their annotated locations for XP_001686142.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    Q4Q3F6
    Conserved Domains (1) summary
    cl16914
    Location:362 → 459
    O-FucT_like; GDP-fucose protein O-fucosyltransferase and related proteins
Nucleotide Protein
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