rspry1 ring finger and SPRY domain containing 1 [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: rspry1provided by ZNC
Official Full Name: ring finger and SPRY domain containing 1provided by ZNC
Primary source: ZFIN:ZDB-GENE-061026-2
See related: Ensembl:ENSDARG00000062558 AllianceGenome:ZFIN:ZDB-GENE-061026-2
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: si:ch211-257c9.1
Summary: Predicted to enable ubiquitin-protein transferase activity. Predicted to be involved in proteolysis involved in cellular protein catabolic process. Predicted to be active in cytoplasm. Orthologous to human RSPRY1 (ring finger and SPRY domain containing 1). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 18

Exon count:: 15

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	18	NC_007129.7 (17725630..17751845)
105	previous assembly	GRCz10 (GCF_000002035.5)	18	NC_007129.6 (17736564..17762779)

Chromosome 18 - NC_007129.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables metal ion binding	IEA Inferred from Electronic Annotation more info
enables ubiquitin-protein transferase activity	IBA Inferred from Biological aspect of Ancestor more info
enables ubiquitin-protein transferase activity	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
involved_in proteolysis involved in protein catabolic process	IBA Inferred from Biological aspect of Ancestor more info

Component	Evidence Code	Pubs
is_active_in cytoplasm	IBA Inferred from Biological aspect of Ancestor more info

General protein information

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Preferred Names: RING finger and SPRY domain-containing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001045072.2 → NP_001038537.2 RING finger and SPRY domain-containing protein 1 precursor

See identical proteins and their annotated locations for NP_001038537.2

Status: PROVISIONAL

Source sequence(s)

BC134970

UniProtKB/TrEMBL

A4IG82

Related

ENSDARP00000085041.5, ENSDART00000090608.6

Conserved Domains (2) summary

pfam13920
Location:527 → 572

zf-C3HC4_3; Zinc finger, C3HC4 type (RING finger)

cd12883
Location:363 → 483

SPRY_RING; SPRY domain at N-terminus of Really Interesting New Gene (RING) finger domain