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ALG9 Asparagine-linked glycosylation protein 9 [ Leishmania major strain Friedlin ]

Gene ID: 5649906, updated on 30-Oct-2024

Summary

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Gene symbol
ALG9
Gene description
Asparagine-linked glycosylation protein 9
Locus tag
LMJF_12_0160
Gene type
protein coding
RNA name
Asparagine-linked glycosylation protein 9
RefSeq status
PROVISIONAL
Organism
Leishmania major strain Friedlin (strain: Friedlin)
Lineage
Eukaryota; Euglenozoa; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania
Orthologs
all
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Genomic context

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See ALG9 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
1
Sequence:
Chromosome: 12; NC_007253.2 (49885..52353)

Chromosome 12 - NC_007253.2Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene putative leucine-rich repeat protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_007253.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome of the kinetoplastid parasite, Leishmania major. Ivens AC, et al. Science, 2005 Jul 15. PMID 16020728, Free PMC Article
  2. Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania. Rogers MB, et al. Genome Res, 2011 Dec. PMID 22038252, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,2-mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
Asparagine-linked glycosylation protein 9
XP_001681621.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_007253.2 Reference assembly

    Range
    49885..52353
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001681569.1 → XP_001681621.1  Asparagine-linked glycosylation protein 9 [Leishmania major strain Friedlin]

    See identical proteins and their annotated locations for XP_001681621.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    Q4QGS7
    Conserved Domains (1) summary
    cl21590
    Location:14 → 475
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase
Nucleotide Protein
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Gene LinkOut

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