U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

gucd1 guanylyl cyclase domain containing 1 [ Danio rerio (zebrafish) ]

Gene ID: 564677, updated on 2-Nov-2024

Summary

Official Symbol
gucd1provided by ZNC
Official Full Name
guanylyl cyclase domain containing 1provided by ZNC
Primary source
ZFIN:ZDB-GENE-060929-872
See related
Ensembl:ENSDARG00000068438 AllianceGenome:ZFIN:ZDB-GENE-060929-872
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
wu:fi27d12; zgc:152874
Summary
Orthologous to human GUCD1 (guanylyl cyclase domain containing 1). [provided by Alliance of Genome Resources, Nov 2024]
Orthologs
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See gucd1 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 8 NC_007119.7 (30730594..30742233, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 8 NC_007119.6 (30721362..30733001, complement)

Chromosome 8 - NC_007119.7Genomic Context describing neighboring genes Neighboring gene adenosine A2a receptor a Neighboring gene chromosome 8 C22orf15 homolog Neighboring gene ureidopropionase, beta Neighboring gene small nuclear ribonucleoprotein D3 polypeptide Neighboring gene purinergic receptor P2X, ligand-gated ion channel, 4b

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

General gene information

Markers

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001077162.2NP_001070630.1  protein GUCD1

    See identical proteins and their annotated locations for NP_001070630.1

    Status: VALIDATED

    Source sequence(s)
    CR848681, EH538861, EH546653
    UniProtKB/TrEMBL
    A0A8M1NBL3, Q08CN7
    Related
    ENSDARP00000089757.3, ENSDART00000098986.4
    Conserved Domains (1) summary
    pfam09778
    Location:9222
    Guanylate_cyc_2; Guanylylate cyclase

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007119.7 Reference GRCz11 Primary Assembly

    Range
    30730594..30742233 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCz11 ALT_DRER_TU_1

Genomic

  1. NW_018394731.1 Reference GRCz11 ALT_DRER_TU_1

    Range
    328442..340081 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)