tspan37 tetraspanin 37 [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: tspan37provided by ZNC
Official Full Name: tetraspanin 37provided by ZNC
Primary source: ZFIN:ZDB-GENE-070912-550
See related: Ensembl:ENSDARG00000095090 AllianceGenome:ZFIN:ZDB-GENE-070912-550
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: fb04a09; wu:fb04a09; si:dkey-52k20.13
Summary: Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be integral component of plasma membrane. [provided by Alliance of Genome Resources, Apr 2022]
Orthologs: all
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Genomic context

Location:: chromosome: 2

Exon count:: 7

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	2	NC_007113.7 (37135896..37140179, complement)
105	previous assembly	GRCz10 (GCF_000002035.5)	2	NC_007113.6 (37153439..37157722, complement)

Chromosome 2 - NC_007113.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Submit: New GeneRIF Correction

General gene information

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Markers

fb04a09.y1 (e-PCR)
- UniSTS:189851

fb34f08.x1 (e-PCR)
- UniSTS:190444

fb34f08.x1 (e-PCR)
- UniSTS:190445

fc41h09.x1 (e-PCR)
- UniSTS:188156

Gene Ontology Provided by ZFIN

Component	Evidence Code	Pubs
located_in membrane	IEA Inferred from Electronic Annotation more info
is_active_in plasma membrane	IBA Inferred from Biological aspect of Ancestor more info

General protein information

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Preferred Names: tetraspanin 37

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001305572.1 → NP_001292501.1 tetraspanin 37

Status: VALIDATED

Source sequence(s)

BX649372, EH456345

UniProtKB/TrEMBL

A0A8M1P6D4, E9QH97

Related

ENSDARP00000113012.1, ENSDART00000144220.2

Conserved Domains (2) summary

cd03163
Location:102 → 195

TM4SF8_like_LEL; Tetraspanin, extracellular domain or large extracellular loop (LEL), TM4SF8_like subfamily. Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment ...

pfam00335
Location:14 → 194

Tetraspannin; Tetraspanin family