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Amotl2 angiomotin-like 2 [ Mus musculus (house mouse) ]

Gene ID: 56332, updated on 2-Nov-2024

Summary

Official Symbol
Amotl2provided by MGI
Official Full Name
angiomotin-like 2provided by MGI
Primary source
MGI:MGI:1929286
See related
Ensembl:ENSMUSG00000032531 AllianceGenome:MGI:1929286
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Lccp; MASCOT; mKIAA0989
Summary
Enables actin filament binding activity and identical protein binding activity. Involved in endothelial cell morphogenesis. Located in apical plasma membrane; bicellular tight junction; and cytoplasmic vesicle. Is expressed in several structures, including brain ventricular layer; dorsal aorta; gonad; telencephalon; and trophectoderm. Orthologous to human AMOTL2 (angiomotin like 2). [provided by Alliance of Genome Resources, Nov 2024]
Expression
Broad expression in adrenal adult (RPKM 51.4), lung adult (RPKM 30.8) and 23 other tissues See more
Orthologs
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Genomic context

See Amotl2 in Genome Data Viewer
Location:
9 F1; 9 54.71 cM
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 9 NC_000075.7 (102594290..102610616)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 9 NC_000075.6 (102717091..102733418)

Chromosome 9 - NC_000075.7Genomic Context describing neighboring genes Neighboring gene centrosomal protein 63 Neighboring gene CapStarr-seq enhancer MGSCv37_chr9:102528825-102529014 Neighboring gene anaphase promoting complex subunit 13 Neighboring gene VISTA enhancer mm1302 Neighboring gene STARR-seq mESC enhancer starr_25068 Neighboring gene predicted gene, 46150 Neighboring gene STARR-seq mESC enhancer starr_25069 Neighboring gene predicted gene 5627 Neighboring gene predicted gene, 46151

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (3) 
  • Targeted (1)  1 citation

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables actin filament binding IMP
Inferred from Mutant Phenotype
more info
PubMed 
enables identical protein binding IDA
Inferred from Direct Assay
more info
PubMed 
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables protein-containing complex binding IPI
Inferred from Physical Interaction
more info
PubMed 
Process Evidence Code Pubs
involved_in Wnt signaling pathway IEA
Inferred from Electronic Annotation
more info
 
involved_in actin cytoskeleton organization IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in angiogenesis IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in endothelial cell morphogenesis IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in establishment of cell polarity involved in ameboidal cell migration IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in hippo signaling IBA
Inferred from Biological aspect of Ancestor
more info
 
acts_upstream_of_or_within hippo signaling ISO
Inferred from Sequence Orthology
more info
 
involved_in negative regulation of transcription by RNA polymerase II ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in positive regulation of protein localization ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in regulation of cell migration IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
located_in apical plasma membrane IDA
Inferred from Direct Assay
more info
PubMed 
is_active_in bicellular tight junction IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in bicellular tight junction IDA
Inferred from Direct Assay
more info
PubMed 
located_in cell junction IDA
Inferred from Direct Assay
more info
PubMed 
located_in cell projection IEA
Inferred from Electronic Annotation
more info
 
located_in cytoplasm IDA
Inferred from Direct Assay
more info
PubMed 
is_active_in cytoplasmic vesicle IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in cytoplasmic vesicle IDA
Inferred from Direct Assay
more info
PubMed 
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in podosome ISS
Inferred from Sequence or Structural Similarity
more info
 
located_in recycling endosome IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
angiomotin-like protein 2
Names
Leman coiled-coil protein

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001421298.1NP_001408227.1  angiomotin-like protein 2

    Status: VALIDATED

    Source sequence(s)
    CT573150
    UniProtKB/Swiss-Prot
    B8JK80, Q3TPM1, Q7TPE4, Q8BP84, Q8BS08, Q8K371, Q9QUS0
  2. NM_001421301.1NP_001408230.1  angiomotin-like protein 2

    Status: VALIDATED

    Source sequence(s)
    CT573150
    UniProtKB/Swiss-Prot
    B8JK80, Q3TPM1, Q7TPE4, Q8BP84, Q8BS08, Q8K371, Q9QUS0
    Related
    ENSMUSP00000121113.2, ENSMUST00000153965.8
  3. NM_019764.2NP_062738.2  angiomotin-like protein 2

    See identical proteins and their annotated locations for NP_062738.2

    Status: VALIDATED

    Source sequence(s)
    AK141348, BB726257
    Consensus CDS
    CCDS40745.1
    UniProtKB/Swiss-Prot
    B8JK80, Q3TPM1, Q7TPE4, Q8BP84, Q8BS08, Q8K371, Q9QUS0
    UniProtKB/TrEMBL
    B8JK87
    Related
    ENSMUSP00000035121.8, ENSMUST00000035121.14
    Conserved Domains (2) summary
    COG1196
    Location:301578
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    pfam12240
    Location:478679
    Angiomotin_C; Angiomotin C terminal

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000075.7 Reference GRCm39 C57BL/6J

    Range
    102594290..102610616
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006511772.4XP_006511835.1  angiomotin-like protein 2 isoform X2

    UniProtKB/TrEMBL
    B8JK87
    Conserved Domains (2) summary
    COG1196
    Location:324601
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    pfam12240
    Location:501702
    Angiomotin_C; Angiomotin C terminal