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si:dkey-261m9.11 si:dkey-261m9.11 [ Danio rerio (zebrafish) ]

Gene ID: 563177, updated on 2-Nov-2024

Summary

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Official Symbol
si:dkey-261m9.11provided by ZNC
Official Full Name
si:dkey-261m9.11provided by ZNC
Primary source
ZFIN:ZDB-GENE-131127-102
See related
AllianceGenome:ZFIN:ZDB-GENE-131127-102
Gene type
protein coding
RefSeq status
MODEL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Summary
Orthologous to several human genes including H2AC11 (H2A clustered histone 11); H2AC13 (H2A clustered histone 13); and H2AC15 (H2A clustered histone 15). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See si:dkey-261m9.11 in Genome Data Viewer
Location:
chromosome: 25
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 25 NC_007136.7 (35127147..35140792, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 25 NC_007136.6 (34635355..34635827, complement)

Chromosome 25 - NC_007136.7Genomic Context describing neighboring genes Neighboring gene histone H1 like 3 Neighboring gene si:ch73-36p18.4 Neighboring gene histone H2B 1/2-like Neighboring gene si:dkey-261m9.6 Neighboring gene si:dkey-261m9.7 Neighboring gene si:dkey-261m9.8 Neighboring gene si:dkey-261m9.9 Neighboring gene zgc:173585 Neighboring gene histone H3 Neighboring gene si:dkey-261m9.12 Neighboring gene si:dkey-261m9.13

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Novel O-GlcNAcylation on Ser(40) of canonical H2A isoforms specific to viviparity. Hirosawa M, et al. Sci Rep, 2016 Sep 12. PMID 27615797, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
LOW QUALITY PROTEIN: uncharacterized protein si:dkey-261m9.11

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007136.7 Reference GRCz11 Primary Assembly

    Range
    35127147..35140792 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009298192.4 → XP_009296467.2  LOW QUALITY PROTEIN: uncharacterized protein si:dkey-261m9.11

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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