NEW
Try the new Transcript table
These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001145577.1 → NP_001139049.1 LIM and calponin homology domains-containing protein 1a isoform 2
Status: PROVISIONAL
- Source sequence(s)
-
BX323984
- UniProtKB/TrEMBL
- A0A8M1NT62, B8A4X7
- Related
- ENSDARP00000120339.1, ENSDART00000132379.2
- Conserved Domains (4) summary
-
- cd00014
Location:27 → 107
- CH; Calponin homology domain; actin-binding domain which may be present as a single copy or in tandem repeats (which increases binding affinity). The CH domain is found in cytoskeletal and signal transduction proteins, including actin-binding proteins like ...
- pfam00412
Location:949 → 1011
- LIM; LIM domain
- pfam15949
Location:247 → 404
- DUF4757; Domain of unknown function (DUF4757)
- cl20817
Location:726 → 761
- GBP_C; Guanylate-binding protein, C-terminal domain
-
NM_001430852.1 → NP_001417781.1 LIM and calponin homology domains-containing protein 1a isoform 1
Status: PROVISIONAL
- Source sequence(s)
-
BX323984
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCz11 Primary Assembly
Genomic
-
NC_007112.7 Reference GRCz11 Primary Assembly
- Range
-
18965655..19070270
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_068219969.1 → XP_068076070.1 LIM and calponin homology domains-containing protein 1a isoform X1
-
XM_068219970.1 → XP_068076071.1 LIM and calponin homology domains-containing protein 1a isoform X3
-
XM_068219973.1 → XP_068076074.1 LIM and calponin homology domains-containing protein 1a isoform X4
-
XM_021475267.2 → XP_021330942.1 LIM and calponin homology domains-containing protein 1a isoform X2
- UniProtKB/TrEMBL
-
A0A8M9PHW0
- Conserved Domains (3) summary
-
- cd00014
Location:27 → 107
- CH; Calponin homology domain; actin-binding domain which may be present as a single copy or in tandem repeats (which increases binding affinity). The CH domain is found in cytoskeletal and signal transduction proteins, including actin-binding proteins like ...
- pfam00412
Location:1890 → 1952
- LIM; LIM domain
- pfam15949
Location:1166 → 1308
- DUF4757; Domain of unknown function (DUF4757)
-
XM_021475273.2 → XP_021330948.1 LIM and calponin homology domains-containing protein 1a isoform X6
- UniProtKB/TrEMBL
-
A0A8M9PV51
- Conserved Domains (3) summary
-
- cd00014
Location:27 → 107
- CH; Calponin homology domain; actin-binding domain which may be present as a single copy or in tandem repeats (which increases binding affinity). The CH domain is found in cytoskeletal and signal transduction proteins, including actin-binding proteins like ...
- pfam00412
Location:1774 → 1836
- LIM; LIM domain
- pfam15949
Location:1050 → 1192
- DUF4757; Domain of unknown function (DUF4757)
-
XM_021475270.2 → XP_021330945.1 LIM and calponin homology domains-containing protein 1a isoform X5
- UniProtKB/TrEMBL
-
A0A8M9QBW7
- Conserved Domains (3) summary
-
- cd00014
Location:27 → 107
- CH; Calponin homology domain; actin-binding domain which may be present as a single copy or in tandem repeats (which increases binding affinity). The CH domain is found in cytoskeletal and signal transduction proteins, including actin-binding proteins like ...
- pfam00412
Location:1784 → 1846
- LIM; LIM domain
- pfam15949
Location:1060 → 1202
- DUF4757; Domain of unknown function (DUF4757)
-
XM_021475278.2 → XP_021330953.1 LIM and calponin homology domains-containing protein 1a isoform X7
- UniProtKB/TrEMBL
-
A0A8M9PV53
- Conserved Domains (4) summary
-
- cd00014
Location:27 → 107
- CH; Calponin homology domain; actin-binding domain which may be present as a single copy or in tandem repeats (which increases binding affinity). The CH domain is found in cytoskeletal and signal transduction proteins, including actin-binding proteins like ...
- pfam00412
Location:1502 → 1564
- LIM; LIM domain
- pfam15949
Location:778 → 920
- DUF4757; Domain of unknown function (DUF4757)
- cl20817
Location:1279 → 1314
- GBP_C; Guanylate-binding protein, C-terminal domain