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vtg8 vitellogenin 8 [ Danio rerio (zebrafish) ]

Gene ID: 560066, updated on 2-Nov-2024

Summary

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Official Symbol
vtg8provided by ZNC
Official Full Name
vitellogenin 8provided by ZNC
Primary source
ZFIN:ZDB-GENE-091106-1
See related
Ensembl:ENSDARG00000092028 AllianceGenome:ZFIN:ZDB-GENE-091106-1
Gene type
protein coding
RefSeq status
MODEL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
si:dkey-4c23.3
Summary
Predicted to enable lipid transporter activity and nutrient reservoir activity. Predicted to act upstream of or within lipid transport. Is expressed in intestine; liver; and ovary. [provided by Alliance of Genome Resources, Nov 2024]
Orthologs
all
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Genomic context

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See vtg8 in Genome Data Viewer
Location:
chromosome: 22
Exon count:
30
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 22 NC_007133.7 (24888851..24900385, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 22 NC_007133.6 (24860895..24872770, complement)

Chromosome 22 - NC_007133.7Genomic Context describing neighboring genes Neighboring gene vitellogenin 7 Neighboring gene vitellogenin 2 Neighboring gene uncharacterized LOC101886000 Neighboring gene sialoadhesin Neighboring gene sialoadhesin

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables lipid transporter activity IEA
Inferred from Electronic Annotation
more info
  
enables nutrient reservoir activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within lipid transport IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
vitellogenin
Names
vtg1-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007133.7 Reference GRCz11 Primary Assembly

    Range
    24888851..24900385 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_068216494.1 → XP_068072595.1  vitellogenin isoform X1

    Related
    ENSDARP00000120763.1, ENSDART00000147643.2

Reference GRCz11 ALT_DRER_TU_1

Genomic

  1. NW_018395108.1 Reference GRCz11 ALT_DRER_TU_1

    Range
    241519..251957 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_068219000.1 → XP_068075101.1  vitellogenin isoform X2

Reference GRCz11 ALT_DRER_TU_2

Genomic

  1. NW_018395353.1 Reference GRCz11 ALT_DRER_TU_2

    Range
    53319..64853 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_068219377.1 → XP_068075478.1  vitellogenin isoform X1

Nucleotide Protein
Heading Accession and Version

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