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TRUGW13939_09655 uncharacterized protein [ Talaromyces rugulosus ]

Gene ID: 55997138, updated on 31-Oct-2024

Summary

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Gene symbol
TRUGW13939_09655
Gene description
uncharacterized protein
Locus tag
TRUGW13939_09655
Gene type
protein coding
RNA name
uncharacterized protein
RefSeq status
PROVISIONAL
Organism
Talaromyces rugulosus (strain: W13939)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Trichocomaceae; Talaromyces; Talaromyces sect. Islandici
Orthologs
Aspergillus fumigatus all
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Genomic context

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See TRUGW13939_09655 in Genome Data Viewer
Location:
chromosome: V
Exon count:
4
Sequence:
Chromosome: V; NC_049565.1 (3174256..3177849)

Chromosome V - NC_049565.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_049565.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intra-Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in trans-Golgi network IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_049565.1 Reference assembly

    Range
    3174256..3177849
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035492775.1 → XP_035348668.1  uncharacterized protein TRUGW13939_09655 [Talaromyces rugulosus]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A7H8R7X4
    Conserved Domains (3) summary
    cd07608
    Location:307 → 507
    BAR_ArfGAP_fungi; The Bin/Amphiphysin/Rvs (BAR) domain of uncharacterized fungal Arf GAP proteins
    cd08204
    Location:827 → 935
    ArfGap; GTPase-activating protein (GAP) for the ADP ribosylation factors (ARFs)
    cl17171
    Location:665 → 748
    PH-like; Pleckstrin homology-like domain
Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases