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TRUGW13939_09515 uncharacterized protein [ Talaromyces rugulosus ]

Gene ID: 55996998, updated on 14-Dec-2023

Summary

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Gene symbol
TRUGW13939_09515
Gene description
uncharacterized protein
Locus tag
TRUGW13939_09515
Gene type
protein coding
RNA name
uncharacterized protein
RefSeq status
PROVISIONAL
Organism
Talaromyces rugulosus (strain: W13939)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Trichocomaceae; Talaromyces; Talaromyces sect. Islandici
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Genomic context

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See TRUGW13939_09515 in Genome Data Viewer
Location:
chromosome: V
Exon count:
1
Sequence:
Chromosome: V; NC_049565.1 (2768256..2774555, complement)

Chromosome V - NC_049565.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_049565.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 3-oxoacyl-[acyl-carrier-protein] synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables fatty acid synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphopantetheine binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fatty acid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in secondary metabolite biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_049565.1 Reference assembly

    Range
    2768256..2774555 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035492637.1 → XP_035348530.1  uncharacterized protein TRUGW13939_09515 [Talaromyces rugulosus]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A7H8R7Z0
    Conserved Domains (5) summary
    COG3321
    Location:372 → 1340
    PksD; Acyl transferase domain in polyketide synthase (PKS) enzymes [Secondary metabolites biosynthesis, transport and catabolism]
    TIGR04532
    Location:1283 → 1610
    PT_fungal_PKS; iterative type I PKS product template domain
    pfam00550
    Location:1661 → 1722
    PP-binding; Phosphopantetheine attachment site
    pfam16073
    Location:6 → 244
    SAT; Starter unit:ACP transacylase in aflatoxin biosynthesis
    cl21494
    Location:1821 → 1923
    Abhydrolase; alpha/beta hydrolases
Nucleotide Protein
Heading Accession and Version

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