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TRUGW13939_09359 uncharacterized protein [ Talaromyces rugulosus ]

Gene ID: 55996842, updated on 31-Oct-2024

Summary

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Gene symbol
TRUGW13939_09359
Gene description
uncharacterized protein
Locus tag
TRUGW13939_09359
Gene type
protein coding
RNA name
uncharacterized protein
RefSeq status
PROVISIONAL
Organism
Talaromyces rugulosus (strain: W13939)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Trichocomaceae; Talaromyces; Talaromyces sect. Islandici
Orthologs
Aspergillus fumigatus all
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Genomic context

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See TRUGW13939_09359 in Genome Data Viewer
Location:
chromosome: V
Exon count:
7
Sequence:
Chromosome: V; NC_049565.1 (2347695..2352007)

Chromosome V - NC_049565.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_049565.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in vacuolar acidification IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of RAVE complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_049565.1 Reference assembly

    Range
    2347695..2352007
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035492481.1 → XP_035348374.1  uncharacterized protein TRUGW13939_09359 [Talaromyces rugulosus]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A7H8R764
    Conserved Domains (3) summary
    COG2319
    Location:38 → 238
    WD40; WD40 repeat [General function prediction only]
    sd00039
    Location:145 → 186
    7WD40; WD40 repeat [structural motif]
    pfam12234
    Location:604 → 1239
    Rav1p_C; RAVE protein 1 C terminal
Nucleotide Protein
Heading Accession and Version

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