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TRUGW13939_01769 hypothetical protein [ Talaromyces rugulosus ]

Gene ID: 55989279, updated on 14-Dec-2023

Summary

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Gene symbol
TRUGW13939_01769
Gene description
hypothetical protein
Locus tag
TRUGW13939_01769
Gene type
protein coding
RNA name
uncharacterized protein
RefSeq status
PROVISIONAL
Organism
Talaromyces rugulosus (strain: W13939)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Trichocomaceae; Talaromyces; Talaromyces sect. Islandici
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Genomic context

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See TRUGW13939_01769 in Genome Data Viewer
Location:
chromosome: I
Exon count:
6
Sequence:
Chromosome: I; NC_049561.1 (5182989..5184908)

Chromosome I - NC_049561.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_049561.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,2-mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell wall mannoprotein biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mannosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein O-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hypothetical protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_049561.1 Reference assembly

    Range
    5182989..5184908
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035484967.1 → XP_035340860.1  uncharacterized protein TRUGW13939_01769 [Talaromyces rugulosus]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A7H8QMC1
    Conserved Domains (1) summary
    COG5020
    Location:132 → 427
    KTR1; Mannosyltransferase [Carbohydrate transport and metabolism]
Nucleotide Protein
Heading Accession and Version

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