znf593 zinc finger protein 593 [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: znf593provided by ZNC
Official Full Name: zinc finger protein 593provided by ZNC
Primary source: ZFIN:ZDB-GENE-040426-1789
See related: Ensembl:ENSDARG00000044102 AllianceGenome:ZFIN:ZDB-GENE-040426-1789
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: zgc:73396
Summary: Predicted to enable nucleic acid binding activity and zinc ion binding activity. Predicted to act upstream of or within ribosome biogenesis. Predicted to be located in nucleus. Orthologous to human ZNF593 (zinc finger protein 593). [provided by Alliance of Genome Resources, Nov 2024]
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 17

Exon count:: 4

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	17	NC_007128.7 (24684778..24686827)
105	previous assembly	GRCz10 (GCF_000002035.5)	17	NC_007128.6 (24666367..24668426)

Chromosome 17 - NC_007128.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables metal ion binding	IEA Inferred from Electronic Annotation more info
enables nucleic acid binding	IEA Inferred from Electronic Annotation more info
enables zinc ion binding	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
acts_upstream_of_or_within ribosome biogenesis	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in nucleus	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: zinc finger protein 593

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_200817.2 → NP_957111.2 zinc finger protein 593

Status: VALIDATED

Source sequence(s)

CR626962

UniProtKB/TrEMBL

A0A8M1PBU0, E7FCM9

Related

ENSDARP00000120578.1, ENSDART00000146309.3

Conserved Domains (1) summary

COG5112
Location:1 → 108

UFD2; U1-like Zn-finger-containing protein [General function prediction only]