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Atg1 serine/threonine-protein kinase unc-51-like protein Atg1 [ Aedes aegypti (yellow fever mosquito) ]

Gene ID: 5579092, updated on 15-May-2024

Summary

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Gene symbol
Atg1
Gene description
serine/threonine-protein kinase unc-51-like protein Atg1
See related
VectorBase:AAEL019922
Gene type
protein coding
RefSeq status
MODEL
Organism
Aedes aegypti
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae; Culicinae; Aedini; Aedes; Stegomyia
Also known as
AAEL003819; AAEL016987
Orthologs
fruit fly all
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Genomic context

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See Atg1 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
15
Annotation release Status Assembly Chr Location
101 current AaegL5.0 (GCF_002204515.2) 3 NC_035109.1 (342269568..342435329)

Chromosome 3 - NC_035109.1Genomic Context describing neighboring genes Neighboring gene histone H2A-like Neighboring gene uncharacterized LOC110677646 Neighboring gene trophoblast glycoprotein Neighboring gene uncharacterized LOC5579101 Neighboring gene uncharacterized LOC110679069 Neighboring gene defensin-C

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_035109.1 Chromosome 3 Reference AaegL5.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The neurotranscriptome of the Aedes aegypti mosquito. Matthews BJ, et al. BMC Genomics, 2016 Jan 6. PMID 26738925, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein serine/threonine kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in autophagosome organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in autophagy IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in axon extension IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in peptidyl-serine phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of autophagy IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein autophosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in autophagosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
serine/threonine-protein kinase ULK2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Aedes aegypti Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference AaegL5.0 Primary Assembly

Genomic

  1. NC_035109.1 Reference AaegL5.0 Primary Assembly

    Range
    342269568..342435329
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021850435.1 → XP_021706127.1  serine/threonine-protein kinase ULK2 isoform X2

    UniProtKB/TrEMBL
    A0A6I8TL69
    Conserved Domains (1) summary
    cd14120
    Location:15 → 273
    STKc_ULK1_2-like; Catalytic domain of the Serine/Threonine kinases, Unc-51-like kinases 1 and 2, and similar proteins

  2. XM_021850434.1 → XP_021706126.1  serine/threonine-protein kinase ULK2 isoform X1

    UniProtKB/TrEMBL
    A0A6I8TWV2
    Conserved Domains (2) summary
    cd14120
    Location:15 → 273
    STKc_ULK1_2-like; Catalytic domain of the Serine/Threonine kinases, Unc-51-like kinases 1 and 2, and similar proteins
    pfam12063
    Location:660 → 801
    DUF3543; Domain of unknown function (DUF3543)

  3. XM_021850433.1 → XP_021706125.1  serine/threonine-protein kinase ULK2 isoform X1

    UniProtKB/TrEMBL
    A0A6I8TWV2
    Conserved Domains (2) summary
    cd14120
    Location:15 → 273
    STKc_ULK1_2-like; Catalytic domain of the Serine/Threonine kinases, Unc-51-like kinases 1 and 2, and similar proteins
    pfam12063
    Location:660 → 801
    DUF3543; Domain of unknown function (DUF3543)
Nucleotide Protein Strain
Heading Accession and Version

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