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Tmtc4 Transmembrane O-mannosyltransferase targeting cadherins 4 [ Aedes aegypti (yellow fever mosquito) ]

Gene ID: 5577681, updated on 16-May-2024

Summary

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Gene symbol
Tmtc4
Gene description
Transmembrane O-mannosyltransferase targeting cadherins 4
See related
VectorBase:AAEL013316
Gene type
protein coding
RefSeq status
MODEL
Organism
Aedes aegypti
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae; Culicinae; Aedini; Aedes; Stegomyia
Also known as
AAEL013316
Orthologs
fruit fly all
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Genomic context

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See Tmtc4 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
5
Annotation release Status Assembly Chr Location
101 current AaegL5.0 (GCF_002204515.2) 3 NC_035109.1 (33741603..33760221, complement)

Chromosome 3 - NC_035109.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC110679303 Neighboring gene SET domain binding factor Neighboring gene myoneurin Neighboring gene uncharacterized LOC5577684 Neighboring gene uncharacterized LOC5577686

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_035109.1 Chromosome 3 Reference AaegL5.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The neurotranscriptome of the Aedes aegypti mosquito. Matthews BJ, et al. BMC Genomics, 2016 Jan 6. PMID 26738925, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in endoplasmic reticulum unfolded protein response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein O-linked mannosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transmembrane and TPR repeat-containing protein CG5038
Names
smile protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Aedes aegypti Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference AaegL5.0 Primary Assembly

Genomic

  1. NC_035109.1 Reference AaegL5.0 Primary Assembly

    Range
    33741603..33760221 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021848861.1 → XP_021704553.1  transmembrane and TPR repeat-containing protein CG5038

    UniProtKB/TrEMBL
    A0A6R5HWZ4, Q16JI9
    Conserved Domains (3) summary
    COG0457
    Location:449 → 686
    TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
    sd00006
    Location:451 → 479
    TPR; TPR repeat [structural motif]
    pfam08409
    Location:267 → 339
    DUF1736; Domain of unknown function (DUF1736)
Nucleotide Protein Strain
Heading Accession and Version

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