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LOC5575127 uncharacterized LOC5575127 [ Aedes aegypti (yellow fever mosquito) ]

Gene ID: 5575127, updated on 23-Mar-2024

Summary

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Gene symbol
LOC5575127
Gene description
uncharacterized LOC5575127
See related
VectorBase:AAEL000322
Gene type
protein coding
RefSeq status
MODEL
Organism
Aedes aegypti
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae; Culicinae; Aedini; Aedes; Stegomyia
Also known as
AAEL000322
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Genomic context

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See LOC5575127 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
4
Annotation release Status Assembly Chr Location
101 current AaegL5.0 (GCF_002204515.2) 2 NC_035108.1 (123829897..123848984)

Chromosome 2 - NC_035108.1Genomic Context describing neighboring genes Neighboring gene peroxidasin Neighboring gene uncharacterized LOC110675984 Neighboring gene acyl-coenzyme A thioesterase 13-like Neighboring gene uncharacterized LOC110675985 Neighboring gene histone H3-like Neighboring gene integumentary mucin C.1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_035108.1 Chromosome 2 Reference AaegL5.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The neurotranscriptome of the Aedes aegypti mosquito. Matthews BJ, et al. BMC Genomics, 2016 Jan 6. PMID 26738925, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein LOC5575127

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Aedes aegypti Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference AaegL5.0 Primary Assembly

Genomic

  1. NC_035108.1 Reference AaegL5.0 Primary Assembly

    Range
    123829897..123848984
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021842201.1 → XP_021697893.1  uncharacterized protein LOC5575127 isoform X2

    UniProtKB/TrEMBL
    A0A1S4EVI7, Q17PL5
    Conserved Domains (1) summary
    pfam12657
    Location:112 → 186
    TFIIIC_delta; Transcription factor IIIC subunit delta N-term

  2. XM_021842200.1 → XP_021697892.1  uncharacterized protein LOC5575127 isoform X1

    UniProtKB/TrEMBL
    A0A6I8T3A5
    Conserved Domains (2) summary
    pfam12657
    Location:134 → 208
    TFIIIC_delta; Transcription factor IIIC subunit delta N-term
    pfam12660
    Location:617 → 675
    zf-TFIIIC; Putative zinc-finger of transcription factor IIIC complex
Nucleotide Protein Strain
Heading Accession and Version

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