sgca sarcoglycan, alpha [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: sgcaprovided by ZNC
Official Full Name: sarcoglycan, alphaprovided by ZNC
Primary source: ZFIN:ZDB-GENE-041111-121
See related: Ensembl:ENSDARG00000074156 AllianceGenome:ZFIN:ZDB-GENE-041111-121
Gene type: protein coding
RefSeq status: MODEL
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: im:7140706; im:7165146
Summary: Predicted to enable calcium ion binding activity. Predicted to be located in cytoplasm; cytoskeleton; and membrane. Predicted to be part of sarcoglycan complex. Is expressed in several structures, including adaxial cell; alar plate midbrain region; brain; cardiovascular system; and musculature system. Human ortholog(s) of this gene implicated in autosomal recessive limb-girdle muscular dystrophy type 2D and muscular dystrophy. Orthologous to human SGCA (sarcoglycan alpha). [provided by Alliance of Genome Resources, Nov 2024]
Orthologs: all
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Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	12	NC_007123.7 (3078223..3092539)
105	previous assembly	GRCz10 (GCF_000002035.5)	12	NC_007123.6 (3043465..3057935)

Chromosome 12 - NC_007123.7 Genomic Context describing neighboring genes

Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Submit: New GeneRIF Correction

Function	Evidence Code	Pubs
enables calcium ion binding	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in cytoplasm	IEA Inferred from Electronic Annotation more info
located_in cytoskeleton	IEA Inferred from Electronic Annotation more info
located_in membrane	IEA Inferred from Electronic Annotation more info
part_of sarcoglycan complex	IBA Inferred from Biological aspect of Ancestor more info
part_of sarcoglycan complex	IEA Inferred from Electronic Annotation more info

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The following sections contain reference sequences that belong to a specific genome build. Explain