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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001089374.1 → NP_001082843.1 uncharacterized protein LOC557028
See identical proteins and their annotated locations for NP_001082843.1
Status: PREDICTED
- Source sequence(s)
-
BX088533
- UniProtKB/TrEMBL
- A0A0R4IVY2, A0A8M6Z590
- Related
- ENSDARP00000153857.1, ENSDART00000185318.1
- Conserved Domains (3) summary
-
- cd00105
Location:31 → 94
- KH-I; K homology RNA-binding domain, type I. KH binds single-stranded RNA or DNA. It is found in a wide variety of proteins including ribosomal proteins, transcription factors and post-transcriptional modifiers of mRNA. There are two different KH domains that ...
- cd02396
Location:267 → 327
- PCBP_like_KH; K homology RNA-binding domain, PCBP_like. Members of this group possess KH domains in a tandem arrangement. Most members, similar to the poly(C) binding proteins (PCBPs) and Nova, containing three KH domains, with the first and second domains, which are ...
- TIGR03665
Location:266 → 427
- arCOG04150; arCOG04150 universal archaeal KH domain protein
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCz11 Primary Assembly
Genomic
-
NC_007112.7 Reference GRCz11 Primary Assembly
- Range
-
30443195..30510921 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_021474969.2 → XP_021330644.1 uncharacterized protein LOC557028 isoform X2
- UniProtKB/TrEMBL
-
A0A8M9Q0B6
- Conserved Domains (3) summary
-
- cd00105
Location:31 → 94
- KH-I; K homology RNA-binding domain, type I. KH binds single-stranded RNA or DNA. It is found in a wide variety of proteins including ribosomal proteins, transcription factors and post-transcriptional modifiers of mRNA. There are two different KH domains that ...
- cd02396
Location:266 → 326
- PCBP_like_KH; K homology RNA-binding domain, PCBP_like. Members of this group possess KH domains in a tandem arrangement. Most members, similar to the poly(C) binding proteins (PCBPs) and Nova, containing three KH domains, with the first and second domains, which are ...
- pfam00013
Location:348 → 411
- KH_1; KH domain
-
XM_005159949.5 → XP_005160006.1 uncharacterized protein LOC557028 isoform X1
See identical proteins and their annotated locations for XP_005160006.1
- UniProtKB/TrEMBL
- A0A0R4IVY2, A0A8M6Z590
- Related
- ENSDARP00000143916.1, ENSDART00000174868.2
- Conserved Domains (3) summary
-
- cd00105
Location:31 → 94
- KH-I; K homology RNA-binding domain, type I. KH binds single-stranded RNA or DNA. It is found in a wide variety of proteins including ribosomal proteins, transcription factors and post-transcriptional modifiers of mRNA. There are two different KH domains that ...
- cd02396
Location:267 → 327
- PCBP_like_KH; K homology RNA-binding domain, PCBP_like. Members of this group possess KH domains in a tandem arrangement. Most members, similar to the poly(C) binding proteins (PCBPs) and Nova, containing three KH domains, with the first and second domains, which are ...
- TIGR03665
Location:266 → 427
- arCOG04150; arCOG04150 universal archaeal KH domain protein
-
XM_017354915.3 → XP_017210404.1 uncharacterized protein LOC557028 isoform X1
- UniProtKB/TrEMBL
- A0A0R4IVY2, A0A8M6Z590
- Conserved Domains (3) summary
-
- cd00105
Location:31 → 94
- KH-I; K homology RNA-binding domain, type I. KH binds single-stranded RNA or DNA. It is found in a wide variety of proteins including ribosomal proteins, transcription factors and post-transcriptional modifiers of mRNA. There are two different KH domains that ...
- cd02396
Location:267 → 327
- PCBP_like_KH; K homology RNA-binding domain, PCBP_like. Members of this group possess KH domains in a tandem arrangement. Most members, similar to the poly(C) binding proteins (PCBPs) and Nova, containing three KH domains, with the first and second domains, which are ...
- TIGR03665
Location:266 → 427
- arCOG04150; arCOG04150 universal archaeal KH domain protein
Reference GRCz11 ALT_DRER_TU_1
Genomic
-
NW_018394491.1 Reference GRCz11 ALT_DRER_TU_1
- Range
-
324246..338301 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
Reference GRCz11 ALT_DRER_TU_2
Genomic
-
NW_018395218.1 Reference GRCz11 ALT_DRER_TU_2
- Range
-
131724..145664 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)