tdh2 L-threonine dehydrogenase 2 [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: tdh2provided by ZNC
Official Full Name: L-threonine dehydrogenase 2provided by ZNC
Primary source: ZFIN:ZDB-GENE-070620-14
See related: Ensembl:ENSDARG00000001463 AllianceGenome:ZFIN:ZDB-GENE-070620-14
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: zgc:165525
Summary: Predicted to enable L-threonine 3-dehydrogenase activity. Predicted to be involved in threonine catabolic process. Orthologous to human TDH (L-threonine dehydrogenase (pseudogene)). [provided by Alliance of Genome Resources, Oct 2024]
Orthologs: all
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Genomic context

Location:: chromosome: 17

Exon count:: 9

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	17	NC_007128.7 (25414107..25425318)
105	previous assembly	GRCz10 (GCF_000002035.5)	17	NC_007128.6 (25395716..25406927)

Chromosome 17 - NC_007128.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables L-threonine 3-dehydrogenase activity	IBA Inferred from Biological aspect of Ancestor more info

Process	Evidence Code	Pubs
involved_in threonine catabolic process	IBA Inferred from Biological aspect of Ancestor more info

Component	Evidence Code	Pubs
is_active_in cellular_component	ND No biological Data available more info

General protein information

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Preferred Names: L-threonine dehydrogenase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001099417.1 → NP_001092887.1 L-threonine dehydrogenase 2

See identical proteins and their annotated locations for NP_001092887.1

Status: PROVISIONAL

Source sequence(s)

BC142842

UniProtKB/TrEMBL

A5PLC4

Related

ENSDARP00000001363.6, ENSDART00000001691.8

Conserved Domains (2) summary

cd05272
Location:45 → 351

TDH_SDR_e; L-threonine dehydrogenase, extended (e) SDRs

COG0451
Location:60 → 355

WcaG; Nucleoside-diphosphate-sugar epimerase [Cell wall/membrane/envelope biogenesis]