zgc:161973 zgc:161973 [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: zgc:161973provided by ZNC
Official Full Name: zgc:161973provided by ZNC
Primary source: ZFIN:ZDB-GENE-070410-13
See related: Ensembl:ENSDARG00000029848 AllianceGenome:ZFIN:ZDB-GENE-070410-13
Gene type: protein coding
RefSeq status: PREDICTED
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Summary: Predicted to be part of SCF ubiquitin ligase complex. Orthologous to human FBXO15 (F-box protein 15). [provided by Alliance of Genome Resources, Nov 2024]
Orthologs: all
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Genomic context

See zgc:161973 in Genome Data Viewer

Location:: chromosome: 2

Exon count:: 10

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	2	NC_007113.7 (22659841..22677012)
105	previous assembly	GRCz10 (GCF_000002035.5)	2	NC_007113.6 (23004190..23021361)

Chromosome 2 - NC_007113.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

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General gene information

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Markers

fb57d01 (e-PCR)
- UniSTS:187227

AI477517 (e-PCR)
- UniSTS:206457

Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables molecular_function	ND No biological Data available more info

Component	Evidence Code	Pubs
part_of SCF ubiquitin ligase complex	IBA Inferred from Biological aspect of Ancestor more info

General protein information

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Preferred Names: uncharacterized protein LOC556635

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.