rcc1l RCC1 like [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: rcc1lprovided by ZNC
Official Full Name: RCC1 likeprovided by ZNC
Primary source: ZFIN:ZDB-GENE-060526-370
See related: Ensembl:ENSDARG00000059583 AllianceGenome:ZFIN:ZDB-GENE-060526-370
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: wbscr16; si:dkeyp-36f5.3
Summary: Human ortholog(s) of this gene implicated in Williams-Beuren syndrome. Orthologous to human RCC1L (RCC1 like). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 5

Exon count:: 12

Annotation release	Status	Assembly	Chr	Location
106	current	GRCz11 (GCF_000002035.6)	5	NC_007116.7 (61404497..61431786, complement)
105	previous assembly	GRCz10 (GCF_000002035.5)	5	NC_007116.6 (60719776..60747065, complement)

Chromosome 5 - NC_007116.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables guanyl-nucleotide exchange factor activity	IBA Inferred from Biological aspect of Ancestor more info
enables rRNA binding	IBA Inferred from Biological aspect of Ancestor more info

Process	Evidence Code	Pubs
involved_in positive regulation of mitochondrial translation	IBA Inferred from Biological aspect of Ancestor more info

Component	Evidence Code	Pubs
is_active_in mitochondrial inner membrane	IBA Inferred from Biological aspect of Ancestor more info

General protein information

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Preferred Names: RCC1-like G exchanging factor-like protein

Names: Williams-Beuren syndrome chromosome region 16 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001082803.1 → NP_001076272.1 RCC1-like G exchanging factor-like protein

See identical proteins and their annotated locations for NP_001076272.1

Status: PROVISIONAL

Source sequence(s)

BC133897

UniProtKB/TrEMBL

A3KNL0

Related

ENSDARP00000077387.3, ENSDART00000082952.4

Conserved Domains (2) summary

pfam00415
Location:400 → 446

RCC1; Regulator of chromosome condensation (RCC1) repeat

pfam13540
Location:219 → 248

RCC1_2; Regulator of chromosome condensation (RCC1) repeat