pusl1 pseudouridine synthase like 1 [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: pusl1provided by ZNC
Official Full Name: pseudouridine synthase like 1provided by ZNC
Primary source: ZFIN:ZDB-GENE-101110-1
See related: Ensembl:ENSDARG00000074565 AllianceGenome:ZFIN:ZDB-GENE-101110-1
Gene type: protein coding
RefSeq status: MODEL
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Summary: Predicted to enable RNA binding activity and tRNA pseudouridine(38-40) synthase activity. Predicted to act upstream of or within pseudouridine synthesis and tRNA processing. Orthologous to human PUSL1 (pseudouridine synthase like 1). [provided by Alliance of Genome Resources, Nov 2024]
Orthologs: human mouse all
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Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	11	NC_007122.7 (3499136..3521095)
105	previous assembly	GRCz10 (GCF_000002035.5)	11	NC_007122.6 (3479724..3501761)

Chromosome 11 - NC_007122.7 Genomic Context describing neighboring genes

Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Submit: New GeneRIF Correction

Function	Evidence Code	Pubs
enables RNA binding	IEA Inferred from Electronic Annotation more info
enables isomerase activity	IEA Inferred from Electronic Annotation more info
enables pseudouridine synthase activity	IEA Inferred from Electronic Annotation more info
enables tRNA pseudouridine(38-40) synthase activity	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
acts_upstream_of_or_within RNA modification	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within pseudouridine synthesis	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within tRNA processing	IEA Inferred from Electronic Annotation more info

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The following sections contain reference sequences that belong to a specific genome build. Explain