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tfdA alpha-ketoglutarate-dependent 2,4-dichlorophenoxyacetate dioxygenase [ Paraburkholderia hospita ]

Gene ID: 55536829, updated on 10-Oct-2024

Summary

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Gene symbol
tfdA
Gene description
alpha-ketoglutarate-dependent 2,4-dichlorophenoxyacetate dioxygenase
Locus tag
C2L64_RS52595
Gene type
protein coding
RefSeq status
PIPELINE
Organism
Paraburkholderia hospita (strain: DSM 17164, culture-collection: DSM:17164, type-material: type strain of Burkholderia hospita)
Lineage
Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Paraburkholderia
Old locus tag
C2L64_52590
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Genomic context

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Location:
plasmid: pEMT1

NZ_CP026110.1Genomic Context describing neighboring genes Neighboring gene thiolase family protein Neighboring gene acyl-CoA synthetase Neighboring gene LysR substrate-binding domain-containing protein Neighboring gene IclR family transcriptional regulator C-terminal domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NZ_CP026110.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparison of 16S rRNA gene phylogeny and functional tfdA gene distribution in thirty-one different 2,4-dichlorophenoxyacetic acid and 4-chloro-2-methylphenoxyacetic acid degraders. Baelum J, et al. Syst Appl Microbiol, 2010 Mar. PMID 20206455
  2. Alternative reactivity of an alpha-ketoglutarate-dependent iron(II) oxygenase: enzyme self-hydroxylation. Liu A, et al. J Am Chem Soc, 2001 May 30. PMID 11457355
  3. Site-directed mutagenesis of 2,4-dichlorophenoxyacetic acid/alpha-ketoglutarate dioxygenase. Identification of residues involved in metallocenter formation and substrate binding. Hogan DA, et al. J Biol Chem, 2000 Apr 28. PMID 10777523
  4. Genetic organization of the catabolic plasmid pJP4 from Ralstonia eutropha JMP134 (pJP4) reveals mechanisms of adaptation to chloroaromatic pollutants and evolution of specialized chloroaromatic degradation pathways. Trefault N, et al. Environ Microbiol, 2004 Jul. PMID 15186344
  5. X-ray crystal structure of Escherichia coli taurine/alpha-ketoglutarate dioxygenase complexed to ferrous iron and substrates. Elkins JM, et al. Biochemistry, 2002 Apr 23. PMID 11955067

See all (6) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
alpha-ketoglutarate-dependent 2,4-dichlorophenoxyacetate dioxygenase
WP_011178399.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_CP026110.1 Reference assembly

    Range
    13366..14229 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_011178399.1 MULTISPECIES: alpha-ketoglutarate-dependent 2,4-dichlorophenoxyacetate dioxygenase [Burkholderiaceae]

    See identical proteins and their annotated locations for WP_011178399.1

    Status: PIPELINE

    UniProtKB/Swiss-Prot
    B5A9M3, P10088, Q46M53
    UniProtKB/TrEMBL
    A0A1M6YX24, A0A2Z6ITA0, A0A2Z6ITJ5, A0A2Z6ITP8, A0A2Z6IU18, A0A2Z6IU24, A0A2Z6IUL3, A0A2Z6IUM3, A0A2Z6IUU4, A0AAN1JNW0, B5A9L8, B5A9L9, B5A9M0, B5A9M1, B5A9M2
    Conserved Domains (1) summary
    pfam02668
    Location:7 → 279
    TauD; Taurine catabolism dioxygenase TauD, TfdA family
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P10088.1

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